RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 C11orf65Q8NCR3 313 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 DNAAF1Q8NEP3 725 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 PMM1Q92871 262 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 EIF2DP41214 584 aaKnown RBP8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 GSCP56915 257 aaPredicted RBP8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 PDK4Q16654 411 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 HGSNATQ68CP4 663 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 PDPRQ8NCN5 879 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 SMG8Q8ND04 991 aaKnown RBP8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 TFAP2BQ92481 460 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 NINJ1Q92982 152 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 RGMAQ96B86 450 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 C11orf24Q96F05 449 aaPredicted RBP8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 DCUN1D5Q9BTE7 237 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 PIH1D1Q9NWS0 290 aaKnown RBP8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 SLC22A3O75751 556 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 LRATO95237 230 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 HSD3B1P14060 373 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 GALK1P51570 392 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 NAGLUP54802 743 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 C2orf80Q0P641 193 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 LCP2Q13094 533 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 RGS21Q2M5E4 152 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 ENPP7Q6UWV6 458 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 IRF2BP1Q8IU81 584 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 PLA2G15Q8NCC3 412 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 DNAJB14Q8TBM8 379 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 NKD1Q969G9 470 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 BORCS8Q96FH0 119 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 TBC1D10AQ9BXI6 508 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 NKX2-4Q9H2Z4 354 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 DPEP3Q9H4B8 488 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 SNX15Q9NRS6 342 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 GFRA2O00451 464 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 PRAMEF11O60813 436 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 EDN1P05305 212 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 LIMK2P53671 638 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 TAS2R40P59535 323 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 IFI35P80217 286 aaPredicted RBP8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 MTX3Q5HYI7 312 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 C1orf189Q5VU69 101 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 AAGABQ6PD74 315 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 ZNF615Q8N8J6 731 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 ABHD5Q8WTS1 349 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 SLC44A1Q8WWI5 657 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 MPP4Q96JB8 637 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 ESPL1Q14674 2120 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 ACTR1BP42025 376 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 CTSKP43235 329 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 KHKP50053 298 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 CEBPGP53567 150 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 LRP8Q14114 963 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 SEMA3AQ14563 771 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 C10orf107Q8IVU9 208 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 OR4K17Q8NGC6 315 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 EPYCQ99645 322 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 TRPV5Q9NQA5 729 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 MAN2B2Q9Y2E5 1009 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 DNMT3AQ9Y6K1 912 aaPredicted RBP8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 CPED1A4D0V7 1026 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 TACSTD2P09758 323 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 KIR3DL1P43629 444 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 RPS24P62847 133 aaKnown RBP8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 RNF19BQ6ZMZ0 732 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 CYP2U1Q7Z449 544 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 ZDHHC14Q8IZN3 488 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 SLC34A3Q8N130 599 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 ARMC10Q8N2F6 343 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 DENND6BQ8NEG7 585 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 JOSD2Q8TAC2 188 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 ARMC5Q96C12 935 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 C1GALT1C1Q96EU7 318 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 LGR4Q9BXB1 951 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 CCSER2Q9H7U1 834 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 DTLQ9NZJ0 730 aa8.13□□□□□ -1.11
PCDHB1-201ENST00000306549 DOCK6Q96HP0 2047 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 SLC30A4O14863 429 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 OR1F1O43749 312 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 WASP42768 502 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 GBE1Q04446 702 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 PLEKHG6Q3KR16 790 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 ZER1Q7Z7L7 766 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 UMODL1-AS1Q8N2C9 162 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 OR4C15Q8NGM1 316 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 DGCR14Q96DF8 476 aaKnown RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 LRTM1Q9HBL6 345 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 POPDC3Q9HBV1 291 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 PIGVQ9NUD9 493 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 HS3ST4Q9Y661 456 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 TGM5O43548 720 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 PRAMEF12O95522 483 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 IL33O95760 270 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 PGAM2P15259 253 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 AHCYP23526 432 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 SLC6A9P48067 706 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 LRRC69Q6ZNQ3 347 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 ZNF75CPQ92670 426 aaPredicted RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 TFB2MQ9H5Q4 396 aaKnown RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 EPHA6Q9UF33 1036 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms