RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 ZNF282Q9UDV7 671 aaPredicted RBP13.09□□□□□ -0.31
TRIM56-201ENST00000306085 WDR45Q9Y484 360 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 CDH10Q9Y6N8 788 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 A0A1W2PPL8 197 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 STBD1O95210 358 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 ADAP00813 363 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 QPCTQ16769 361 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 ATG5Q9H1Y0 275 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 NKRFO15226 690 aaKnown RBP eCLIP13.09□□□□□ -0.31
TRIM56-201ENST00000306085 CYP11A1P05108 521 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 CLRN1P58418 232 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 CDNFQ49AH0 187 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 ZNF410Q86VK4 478 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 KIF18BQ86Y91 864 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 TCEANCQ8N8B7 351 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 MAELQ96JY0 434 aaKnown RBP13.09□□□□□ -0.31
TRIM56-201ENST00000306085 MRPS30Q9NP92 439 aaKnown RBP13.09□□□□□ -0.31
TRIM56-201ENST00000306085 TNS3Q68CZ2 1445 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 TEX51A0A1B0GUA7 166 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 A0A1W2PPM1 405 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 RPP40O75818 363 aaKnown RBP13.09□□□□□ -0.31
TRIM56-201ENST00000306085 IKBKEQ14164 716 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 TRIB2Q92519 343 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 SRMSQ9H3Y6 488 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 DPEP2Q9H4A9 486 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 GPATCH2Q9NW75 528 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 TMPRSS11EQ9UL52 423 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 MAGI2Q86UL8 1455 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 CLDN5O00501 218 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 CHRNA4P43681 627 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 EEF1A1P68104 462 aaKnown RBP13.09□□□□□ -0.31
TRIM56-201ENST00000306085 NFKB2Q00653 900 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 EEF1A1P5Q5VTE0 462 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 STYK1Q6J9G0 422 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 LDB1Q86U70 411 aaPredicted RBP13.09□□□□□ -0.31
TRIM56-201ENST00000306085 HINT2Q9BX68 163 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 AHSA1O95433 338 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 SCGB1D1O95968 90 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 RFX5P48382 616 aaPredicted RBP13.09□□□□□ -0.31
TRIM56-201ENST00000306085 TAS2R50P59544 299 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 DNTTIP1Q9H147 329 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 NMUR1Q9HB89 426 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 CLCA3PQ9Y6N3 262 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 PDLIM1O00151 329 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 RPIAP49247 311 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 CDK3Q00526 305 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 MLC1Q15049 377 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 MPP7Q5T2T1 576 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 MARVELD2Q8N4S9 558 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 SAT2Q96F10 170 aaPredicted RBP13.09□□□□□ -0.31
TRIM56-201ENST00000306085 TMEM94Q12767 1356 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 M0R2N6 131 aa13.08□□□□□ -0.31
TRIM56-201ENST00000306085 AFF3P51826 1226 aaKnown RBP13.08□□□□□ -0.31
TRIM56-201ENST00000306085 SELENOVP59797 346 aa13.08□□□□□ -0.31
TRIM56-201ENST00000306085 PGM5Q15124 567 aa13.08□□□□□ -0.31
TRIM56-201ENST00000306085 HERC2P3Q9BVR0 1158 aa13.08□□□□□ -0.31
TRIM56-201ENST00000306085 ADAM18Q9Y3Q7 739 aa13.08□□□□□ -0.31
TRIM56-201ENST00000306085 PCDHGB6Q9Y5F9 930 aa13.08□□□□□ -0.31
TRIM56-201ENST00000306085 TNFRSF10BO14763 440 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 CDH1P12830 882 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 GRM3Q14832 879 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 NUDT4Q9NZJ9 180 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 BLOC1S5-TXNDC5H3BN57 136 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 AMY2BP19961 511 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 MRPL41Q8IXM3 137 aaKnown RBP13.08□□□□□ -0.32
TRIM56-201ENST00000306085 ACER1Q8TDN7 264 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 PNPLA2Q96AD5 504 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 GPR21Q99679 349 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 SALL1Q9NSC2 1324 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 A0A1B0GVI7 797 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 H0Y8G0 127 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 PAOXQ6QHF9 649 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 OR4D6Q8NGJ1 314 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 CPT1BQ92523 772 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 PWWP2AQ96N64 755 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 SLC35A5Q9BS91 424 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 SERTAD4Q9NUC0 356 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 ZNF223Q9UK11 482 aaPredicted RBP13.08□□□□□ -0.32
TRIM56-201ENST00000306085 RBM47A0AV96 593 aaKnown RBP13.08□□□□□ -0.32
TRIM56-201ENST00000306085 PAGE1O75459 146 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 RAP2AP10114 183 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 IDSP22304 550 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 FABP6P51161 128 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 CACNG1Q06432 222 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 C4orf19Q8IY42 314 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 SAMD12Q8N8I0 201 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 STON2Q8WXE9 905 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 FAM83CQ9BQN1 747 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 MRM3Q9HC36 420 aaKnown RBP13.08□□□□□ -0.32
TRIM56-201ENST00000306085 GCM1Q9NP62 436 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 HAO2Q9NYQ3 351 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 CYP1A2P05177 515 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 PTNP21246 168 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 EN1Q05925 392 aaPredicted RBP13.08□□□□□ -0.32
TRIM56-201ENST00000306085 FBXO43Q4G163 708 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 MYRFLQ96LU7 910 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 ASB7Q9H672 318 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 ASF1BQ9NVP2 202 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 PIP5K1CO60331 668 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 SMSP52788 366 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms