RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 MTAPQ13126 283 aa16.06■□□□□ 0.16
CCDC40-201ENST00000269318 PON2Q15165 354 aa16.06■□□□□ 0.16
CCDC40-201ENST00000269318 AASDHQ4L235 1098 aaPredicted RBP16.06■□□□□ 0.16
CCDC40-201ENST00000269318 RUNDC3AQ59EK9 446 aa16.06■□□□□ 0.16
CCDC40-201ENST00000269318 PROSER1Q86XN7 944 aa16.06■□□□□ 0.16
CCDC40-201ENST00000269318 LAS2Q8IYD9 372 aa16.06■□□□□ 0.16
CCDC40-201ENST00000269318 ICA1LQ8NDH6 482 aa16.06■□□□□ 0.16
CCDC40-201ENST00000269318 OR5K2Q8NHB8 316 aa16.06■□□□□ 0.16
CCDC40-201ENST00000269318 GANCQ8TET4 914 aa16.06■□□□□ 0.16
CCDC40-201ENST00000269318 SLC5A11Q8WWX8 675 aa16.06■□□□□ 0.16
CCDC40-201ENST00000269318 GATA6Q92908 595 aa16.06■□□□□ 0.16
CCDC40-201ENST00000269318 IL17FQ96PD4 163 aa16.06■□□□□ 0.16
CCDC40-201ENST00000269318 NR1H4Q96RI1 486 aaPredicted RBP16.06■□□□□ 0.16
CCDC40-201ENST00000269318 EFCAB11Q9BUY7 163 aa16.06■□□□□ 0.16
CCDC40-201ENST00000269318 OSBPL6Q9BZF3 934 aa16.06■□□□□ 0.16
CCDC40-201ENST00000269318 PIF1Q9H611 641 aa16.06■□□□□ 0.16
CCDC40-201ENST00000269318 RPF2Q9H7B2 306 aaKnown RBP16.06■□□□□ 0.16
CCDC40-201ENST00000269318 PHPT1Q9NRX4 125 aaPredicted RBP16.06■□□□□ 0.16
CCDC40-201ENST00000269318 SLC6A13Q9NSD5 602 aa16.06■□□□□ 0.16
CCDC40-201ENST00000269318 GEMIN8Q9NWZ8 242 aaKnown RBP16.06■□□□□ 0.16
CCDC40-201ENST00000269318 CNOT11Q9UKZ1 510 aaKnown RBP16.06■□□□□ 0.16
CCDC40-201ENST00000269318 MTCH2Q9Y6C9 303 aa16.06■□□□□ 0.16
CCDC40-201ENST00000269318 A0A096LPI6 279 aa16.05■□□□□ 0.16
CCDC40-201ENST00000269318 KLHL33A6NCF5 533 aa16.05■□□□□ 0.16
CCDC40-201ENST00000269318 PRMT3O60678 531 aa16.05■□□□□ 0.16
CCDC40-201ENST00000269318 RNGTTO60942 597 aaKnown RBP16.05■□□□□ 0.16
CCDC40-201ENST00000269318 ERN1O75460 977 aaKnown RBP16.05■□□□□ 0.16
CCDC40-201ENST00000269318 TIPRLO75663 272 aa16.05■□□□□ 0.16
CCDC40-201ENST00000269318 LRATO95237 230 aa16.05■□□□□ 0.16
CCDC40-201ENST00000269318 KLF8O95600 359 aaPredicted RBP16.05■□□□□ 0.16
CCDC40-201ENST00000269318 GPIP06744 558 aa16.05■□□□□ 0.16
CCDC40-201ENST00000269318 PCNAP12004 261 aa16.05■□□□□ 0.16
CCDC40-201ENST00000269318 PRPS1L1P21108 318 aa16.05■□□□□ 0.16
CCDC40-201ENST00000269318 PSMA4P25789 261 aaKnown RBP16.05■□□□□ 0.16
CCDC40-201ENST00000269318 PTPN6P29350 595 aa16.05■□□□□ 0.16
CCDC40-201ENST00000269318 RAE1P78406 368 aaKnown RBP16.05■□□□□ 0.16
CCDC40-201ENST00000269318 DMPKQ09013 629 aa16.05■□□□□ 0.16
CCDC40-201ENST00000269318 SGCGQ13326 291 aa16.05■□□□□ 0.16
CCDC40-201ENST00000269318 SLBPQ14493 270 aaKnown RBP eCLIP16.05■□□□□ 0.16
CCDC40-201ENST00000269318 GTDC1Q4AE62 458 aa16.05■□□□□ 0.16
CCDC40-201ENST00000269318 C10orf62Q5T681 223 aaPredicted RBP16.05■□□□□ 0.16
CCDC40-201ENST00000269318 NXPE4Q6UWF7 544 aa16.05■□□□□ 0.16
CCDC40-201ENST00000269318 MSANTD1Q6ZTZ1 278 aa16.05■□□□□ 0.16
CCDC40-201ENST00000269318 ERMP1Q7Z2K6 904 aa16.05■□□□□ 0.16
CCDC40-201ENST00000269318 SETD7Q8WTS6 366 aaKnown RBP16.05■□□□□ 0.16
CCDC40-201ENST00000269318 REPS1Q96D71 796 aa16.05■□□□□ 0.16
CCDC40-201ENST00000269318 SLC17A9Q9BYT1 436 aa16.05■□□□□ 0.16
CCDC40-201ENST00000269318 SEMA6AQ9H2E6 1030 aa16.05■□□□□ 0.16
CCDC40-201ENST00000269318 TRPV5Q9NQA5 729 aa16.05■□□□□ 0.16
CCDC40-201ENST00000269318 PLAGL1Q9UM63 463 aa16.05■□□□□ 0.16
CCDC40-201ENST00000269318 DOCK9Q9BZ29 2069 aa16.05■□□□□ 0.16
CCDC40-201ENST00000269318 PIPSLA2A3N6 862 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 PRR23AA6NEV1 266 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 PI15O43692 258 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 C7P10643 843 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 ZNF26P17031 533 aaPredicted RBP16.04■□□□□ 0.16
CCDC40-201ENST00000269318 IGFALSP35858 605 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 HNRNPFP52597 415 aaKnown RBP16.04■□□□□ 0.16
CCDC40-201ENST00000269318 CYP4F3Q08477 520 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 ACSM2AQ08AH3 577 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 TSTA3Q13630 321 aaPredicted RBP16.04■□□□□ 0.16
CCDC40-201ENST00000269318 MTX3Q5HYI7 312 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 ACSM2BQ68CK6 577 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 DNAJC14Q6Y2X3 702 aaPredicted RBP16.04■□□□□ 0.16
CCDC40-201ENST00000269318 SYT12Q8IV01 421 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 DTWD1Q8N5C7 304 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 CHTF18Q8WVB6 975 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 CCDC115Q96NT0 180 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 MENTQ9BUN1 341 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 SPNS1Q9H2V7 528 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.04■□□□□ 0.16
CCDC40-201ENST00000269318 MAGEL2Q9UJ55 1249 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 AURKCQ9UQB9 309 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 PCDHB14Q9Y5E9 798 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 PIAS3Q9Y6X2 628 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 ATG2BQ96BY7 2078 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 CCDC85CA6NKD9 419 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 EIF4E1BA6NMX2 242 aaKnown RBP16.04■□□□□ 0.16
CCDC40-201ENST00000269318 FOXE1O00358 373 aaPredicted RBP16.04■□□□□ 0.16
CCDC40-201ENST00000269318 HNRNPRO43390 633 aaKnown RBP16.04■□□□□ 0.16
CCDC40-201ENST00000269318 B3GALT4O96024 378 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 BMP2P12643 396 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 SOX11P35716 441 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 RPS13P62277 151 aaKnown RBP16.04■□□□□ 0.16
CCDC40-201ENST00000269318 ARHGAP19Q14CB8 494 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 SF1Q15637 639 aaKnown RBP16.04■□□□□ 0.16
CCDC40-201ENST00000269318 CYP51A1Q16850 503 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 UGT8Q16880 541 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 DPY19L1Q2PZI1 675 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 PAGE2BQ5JRK9 111 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 TBCELQ5QJ74 424 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 PRAMEF14Q5SWL7 426 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 PRAMEF13Q5VWM6 474 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 CAPRIN2Q6IMN6 1127 aaKnown RBP16.04■□□□□ 0.16
CCDC40-201ENST00000269318 LCTLQ6UWM7 567 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 HORMAD1Q86X24 394 aa16.04■□□□□ 0.16
CCDC40-201ENST00000269318 C1orf52Q8N6N3 182 aaKnown RBP16.04■□□□□ 0.16
CCDC40-201ENST00000269318 PAPD5Q8NDF8 572 aaKnown RBP16.04■□□□□ 0.16
CCDC40-201ENST00000269318 GFM2Q969S9 779 aaKnown RBP16.04■□□□□ 0.16
CCDC40-201ENST00000269318 ITCHQ96J02 903 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms