RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 ZBTB48P10074 688 aaPredicted RBP17.56■□□□□ 0.4
COL5A3-201ENST00000264828 GRSF1Q12849 480 aaKnown RBP eCLIP17.56■□□□□ 0.4
COL5A3-201ENST00000264828 DCAF12L1Q5VU92 463 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 SGCDQ92629 289 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 MND1Q9BWT6 205 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 PCBD2Q9H0N5 130 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 LIN28AQ9H9Z2 209 aaKnown RBP17.56■□□□□ 0.4
COL5A3-201ENST00000264828 C2orf92A0A1B0GVN3 265 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 J3QLW9 94 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 GABRDO14764 452 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 IFNA7P01567 189 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 ZNF19P17023 458 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 ZNF517Q6ZMY9 492 aaPredicted RBP17.56■□□□□ 0.4
COL5A3-201ENST00000264828 BPIFB1Q8TDL5 484 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 ELOVL2Q9NXB9 296 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 A8MT66 165 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 AXIN1O15169 862 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 CDRT1O95170 752 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 OTOP2Q7RTS6 562 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 SLC30A8Q8IWU4 369 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 SLC37A3Q8NCC5 494 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 CCDC107Q8WV48 283 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 A8MV72 311 aaPredicted RBP17.55■□□□□ 0.4
COL5A3-201ENST00000264828 ZCCHC3Q9NUD5 404 aaKnown RBP17.55■□□□□ 0.4
COL5A3-201ENST00000264828 ZDHHC18Q9NUE0 388 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 ERVK-11Q9UQG0 969 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 AQP12BA6NM10 295 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 TLX3O43711 291 aaPredicted RBP17.55■□□□□ 0.4
COL5A3-201ENST00000264828 PTNP21246 168 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 EEFSECP57772 596 aaKnown RBP17.55■□□□□ 0.4
COL5A3-201ENST00000264828 SPRYD7Q5W111 196 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 RPS27LQ71UM5 84 aaKnown RBP17.55■□□□□ 0.4
COL5A3-201ENST00000264828 AQP12AQ8IXF9 295 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 YIPF7Q8N8F6 280 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 ASB12Q8WXK4 309 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 FBXL20Q96IG2 436 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 FLRT1Q9NZU1 646 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 UNGP13051 313 aaPredicted RBP17.55■□□□□ 0.4
COL5A3-201ENST00000264828 MPIP34949 423 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 DGKGP49619 791 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 OCLNQ16625 522 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 TRIM74Q86UV6 250 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 TRIM73Q86UV7 250 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 HERVK_113Q902F9 699 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 NXPE2Q96DL1 559 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 TNFRSF10DQ9UBN6 386 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 A0A0G2JLL6 359 aaPredicted RBP17.55■□□□□ 0.4
COL5A3-201ENST00000264828 AURKAO14965 403 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 UFM1P61960 85 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 CYP1B1Q16678 543 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 DRICH1Q6PGQ1 229 aaPredicted RBP17.55■□□□□ 0.4
COL5A3-201ENST00000264828 PRRT2Q7Z6L0 340 aaPredicted RBP17.55■□□□□ 0.4
COL5A3-201ENST00000264828 NUS1Q96E22 293 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 WACQ9BTA9 647 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 ZNF471Q9BX82 626 aaPredicted RBP17.55■□□□□ 0.4
COL5A3-201ENST00000264828 PCDHA2Q9Y5H9 948 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 IL1R2P27930 398 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 HSD11B1P28845 292 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 HFE2Q6ZVN8 426 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 CEP97Q8IW35 865 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 HDDC3Q8N4P3 179 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 RASGEF1AQ8N9B8 481 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 TMEM145Q8NBT3 493 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 CD320Q9NPF0 282 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 P2RX2Q9UBL9 471 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 CFL2Q9Y281 166 aa17.55■□□□□ 0.4
COL5A3-201ENST00000264828 C13orf42A0A1B0GVH6 325 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 PPEF2O14830 753 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 BDKRB1P46663 353 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 RPS3AP61247 264 aaKnown RBP17.54■□□□□ 0.4
COL5A3-201ENST00000264828 LRRC32Q14392 662 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 SIRPB2Q5JXA9 342 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 NCBP2-AS2Q69YL0 99 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 SPATC1Q76KD6 591 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 CLEC4DQ8WXI8 215 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 ZNF641Q96N77 438 aaPredicted RBP17.54■□□□□ 0.4
COL5A3-201ENST00000264828 SLC2A6Q9UGQ3 507 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 PCDHGA12O60330 932 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 TBX18O95935 607 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 EIF1AXP47813 144 aaKnown RBP17.54■□□□□ 0.4
COL5A3-201ENST00000264828 CCR8P51685 355 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 SYPL2Q5VXT5 272 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 PAQR7Q86WK9 346 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 TM9SF2Q99805 663 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 VPS29Q9UBQ0 182 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 I3L521 148 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 AKAP8O43823 692 aaKnown RBP17.54■□□□□ 0.4
COL5A3-201ENST00000264828 SOX14O95416 240 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 FESP07332 822 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 LAPTM4AQ15012 233 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 ZMYND11Q15326 602 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 MEP1AQ16819 746 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 TMEM44Q2T9K0 475 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 PDCD4Q53EL6 469 aaKnown RBP17.54■□□□□ 0.4
COL5A3-201ENST00000264828 SPAG16Q8N0X2 631 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 DPAGT1Q9H3H5 408 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 POFUT2Q9Y2G5 429 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 CFAP20Q9Y6A4 193 aaKnown RBP17.54■□□□□ 0.4
COL5A3-201ENST00000264828 SLIT2O94813 1529 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 A0A1B0GVT2 93 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms