RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 SACM1LQ9NTJ5 587 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 EIF2B4Q9UI10 523 aaKnown RBP13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 A0A1W2PRB8 838 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 FAM20BO75063 409 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 TIPRLO75663 272 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 FOXN2P32314 431 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 CTHP32929 405 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 RORAP35398 523 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 ARFIP1P53367 373 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 NFKB2Q00653 900 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 SYT16Q17RD7 645 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 TMEM52BQ4KMG9 183 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 ZNF730Q6ZMV8 503 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 TMCO2Q7Z6W1 182 aaPredicted RBP13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 LINC01465Q8N7H1 131 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 BTBD10Q9BSF8 475 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 KCNK13Q9HB14 408 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 FLRT2O43155 660 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 NTRK1P04629 796 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 C1GALT1C1LP0DN25 315 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 CLPPQ16740 277 aaPredicted RBP13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 SLC9B1Q4ZJI4 515 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 BICRALQ6AI39 1079 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 Q6ZVL8 140 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 ALG3Q92685 438 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 MMABQ96EY8 250 aaPredicted RBP13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 RNF121Q9H920 327 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 MARCH5Q9NX47 278 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 HCN2Q9UL51 889 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 SNX13Q9Y5W8 968 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 SSC5DA1L4H1 1573 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 UBR3Q6ZT12 1888 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 UGDHO60701 494 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 OR6B1O95007 311 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 SERPINA3P01011 423 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 TSPAN19P0C672 248 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 SFTPCP11686 197 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 NTHL1P78549 312 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 NPTX1Q15818 432 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 CATSPEREQ5SY80 951 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 PPP1R3BQ86XI6 285 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 ZSWIM3Q96MP5 696 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 OR6C2Q9NZP2 312 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 TNRC6CQ9HCJ0 1690 aaKnown RBP13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 GRXCR1A8MXD5 290 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 SRPX2O60687 465 aaPredicted RBP13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 LINC00032P0C843 101 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 GSTM3P21266 225 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 MARCKSL1P49006 195 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 LEXMQ3ZCV2 418 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 LAIR1Q6GTX8 287 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 DEFB107AQ8IZN7 70 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 C2CD4AQ8NCU7 369 aaPredicted RBP13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 ASB16Q96NS5 453 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 RTKNQ9BST9 563 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 CENPXA8MT69 81 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 AP1G1O43747 822 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 AHSA1O95433 338 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 NPPAP01160 153 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 CD46P15529 392 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 BDKRB1P46663 353 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 PLP2Q04941 152 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 MFSD13AQ14CX5 517 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 TMPRSS11AQ6ZMR5 421 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 MEIOBQ8N635 442 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 NXNL1Q96CM4 212 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 SERINC2Q96SA4 455 aa13.04□□□□□ -0.32
PRPF38A-201ENST00000257181 MYH8P13535 1937 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 PRR23D1E9PI22 279 aaPredicted RBP13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 PRR23D2P0DMB1 279 aaPredicted RBP13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 CD70P32970 193 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 ERVK-8P63133 956 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 ADAM15Q13444 863 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 TRIM71Q2Q1W2 868 aaKnown RBP13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 RBM44Q6ZP01 1051 aaKnown RBP13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 MICU2Q8IYU8 434 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 OR13C4Q8NGS5 318 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 EFHD2Q96C19 240 aaPredicted RBP13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 DTD2Q96FN9 168 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 C10orf88Q9H8K7 445 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 ZIM2Q9NZV7 527 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 LIPT1Q9Y234 373 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 HS3ST2Q9Y278 367 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 C17orf113A0A1B0GUU1 675 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 OR10H3O60404 316 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 DCAF7P61962 342 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 MPP1Q00013 466 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 CYP4F3Q08477 520 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 CYS1Q717R9 158 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 TRABD2AQ86V40 505 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 OFCC1Q8IZS5 231 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 XAGE5Q8WWM1 108 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 IGSF8Q969P0 613 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 TCTN2Q96GX1 697 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 METTL2AQ96IZ6 378 aaKnown RBP13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 TRNAU1APQ9NX07 287 aaKnown RBP13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 OSER1Q9NX31 292 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 GPR160Q9UJ42 338 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 HIDE1A8MVS5 230 aa13.03□□□□□ -0.32
PRPF38A-201ENST00000257181 SEC24AO95486 1093 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms