RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 ZSCAN5AQ9BUG6 496 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 LRRC3Q9BY71 257 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 NSUN3Q9H649 340 aaKnown RBP18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 IL1RAPQ9NPH3 570 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 CRTAC1Q9NQ79 661 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 SCML2Q9UQR0 700 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 INSL5Q9Y5Q6 135 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 FZD9O00144 591 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 LEFTY2O00292 366 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 GJB5O95377 273 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 CSTF1Q05048 431 aaKnown RBP18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 CD47Q08722 323 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 SWI5Q1ZZU3 235 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 GPR33Q49SQ1 333 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 ZC3HC1Q86WB0 502 aaKnown RBP18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 PROKR2Q8NFJ6 384 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 SETD7Q8WTS6 366 aaKnown RBP18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 FBXL18Q96ME1 805 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 GDAP2Q9NXN4 497 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 ARPC2O15144 300 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 PNLIPRP1P54315 467 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 PLGLB1Q02325 96 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 PTCHD3Q3KNS1 767 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 ALG1LQ6GMV1 187 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 LGI4Q8N135 537 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 BPIFB1Q8TDL5 484 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 DNAJB9Q9UBS3 223 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 ASB3Q9Y575 518 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 ZNF860A6NHJ4 632 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 TRAPPC6AO75865 159 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 TAS2R50P59544 299 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 LCN1P1Q5VSP4 162 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 TMCO2Q7Z6W1 182 aaPredicted RBP18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 BTBD1Q9H0C5 482 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 MED28Q9H204 178 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 XKR8Q9H6D3 395 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 SNED1Q8TER0 1413 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 LINGO3P0C6S8 592 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 PRKACGP22612 351 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 STK19P49842 368 aaPredicted RBP18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 GLB1L3Q8NCI6 653 aaPredicted RBP18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 POP5Q969H6 163 aaKnown RBP18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 SP140LQ9H930 580 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 ABI3Q9P2A4 366 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 SIX4Q9UIU6 781 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 UPK3BL1B0FP48 263 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 UPK3BL2E5RIL1 263 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 G6PDP11413 515 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 BICRALQ6AI39 1079 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 PHTF2Q8N3S3 785 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 OR5K1Q8NHB7 308 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 PRDM4Q9UKN5 801 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 PRAMEF33A0A0G2JMD5 474 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 OR1I1O60431 355 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 PRAMEF10O60809 474 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 ALDH3A2P51648 485 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 ENPP2Q13822 863 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 SPATA9Q9BWV2 254 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 FLRT1Q9NZU1 646 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 A0A0X1KG70 313 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 RENP00797 406 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 MLLT10P55197 1068 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 BCO2Q9BYV7 579 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 SMOC2Q9H3U7 446 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 A0A1B0GVT2 93 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 PRPS1L1P21108 318 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 AKR1D1P51857 326 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 MLLT6P55198 1093 aaPredicted RBP18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 NRG3P56975 720 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 TCEAL6Q6IPX3 200 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 HIST1H2AAQ96QV6 131 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 SLC7A8Q9UHI5 535 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 MID1O15344 667 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 SNAI1O95863 264 aaPredicted RBP18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 KCNJ5P48544 419 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 OR12D2P58182 307 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 C1orf94Q6P1W5 598 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 IGDCC3Q8IVU1 814 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 TTYH2Q9BSA4 534 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 TMED9Q9BVK6 235 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 ADAM7Q9H2U9 754 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 PDE4DIPQ5VU43 2346 aa18.2■□□□□ 0.5
SMARCC1-201ENST00000254480 FABP12A6NFH5 140 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 CHRNA1P02708 482 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 EIPR1Q53HC9 387 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 PRPF38BQ5VTL8 546 aaKnown RBP18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 C22orf39Q6P5X5 142 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 ASB18Q6ZVZ8 466 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 MED1Q15648 1581 aaPredicted RBP18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 FAM72CH0Y354 149 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 TBX1O43435 398 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 PIGRP01833 764 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 IQCCQ4KMZ1 466 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 FAM72AQ5TYM5 149 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 FAM72DQ6L9T8 149 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 CEACAM20Q6UY09 585 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 FAM92BQ6ZTR7 304 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 FRMD7Q6ZUT3 714 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 PIGWQ7Z7B1 504 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 FAM72BQ86X60 149 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms