RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 SLC9A3R1O14745 358 aaPredicted RBP13.19□□□□□ -0.3
RAB3D-201ENST00000222120 MMP20O60882 483 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 TNFRSF1BP20333 461 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 PSMD8P48556 350 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 CLCN7P51798 805 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 GRIK2Q13002 908 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 SGCGQ13326 291 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 CASP12Q6UXS9 341 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 KRT78Q8N1N4 520 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 PXYLP1Q8TE99 480 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 PIH1D2Q8WWB5 315 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 NDEL1Q9GZM8 345 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 PCDHA9Q9Y5H5 950 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 RBBP6Q7Z6E9 1792 aaKnown RBP13.19□□□□□ -0.3
RAB3D-201ENST00000222120 QSOX1O00391 747 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 OR7A17O14581 309 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 WNT9AO14904 365 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 PCCBP05166 539 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 NR2F1P10589 423 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 AGXTP21549 392 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 FUT4P22083 530 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 TM4SF4P48230 202 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 SBSNQ6UWP8 590 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 EIF3MQ7L2H7 374 aaKnown RBP13.19□□□□□ -0.3
RAB3D-201ENST00000222120 LRRC70Q7Z2Q7 622 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 C17orf64Q86WR6 236 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 MMAAQ8IVH4 418 aaKnown RBP13.19□□□□□ -0.3
RAB3D-201ENST00000222120 HMGCLL1Q8TB92 370 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 SMG7Q92540 1137 aaKnown RBP13.19□□□□□ -0.3
RAB3D-201ENST00000222120 SCRN2Q96FV2 425 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 COX4I2Q96KJ9 171 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 OCEL1Q9H607 264 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 EQTNQ9NQ60 294 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 RHCGQ9UBD6 479 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 RIMKLBQ9ULI2 386 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 PHF24Q9UPV7 400 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 TMEM98Q9Y2Y6 226 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 CCL5P13501 91 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 HMGA1P17096 107 aaKnown RBP13.18□□□□□ -0.3
RAB3D-201ENST00000222120 MYF6P23409 242 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 CST5P28325 142 aaPredicted RBP13.18□□□□□ -0.3
RAB3D-201ENST00000222120 PPP2R1BP30154 601 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 ASMTP46597 345 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 DOC2AQ14183 400 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 FER1L6Q2WGJ9 1857 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 C6orf141Q5SZD1 244 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 CNKSR3Q6P9H4 555 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 FAM86B1Q8N7N1 296 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 OR8J3Q8NGG0 315 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 OR8D1Q8WZ84 308 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 SLC29A3Q9BZD2 475 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 RHBGQ9H310 441 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 LTB4R2Q9NPC1 389 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 TBC1D14Q9P2M4 693 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 PTPRFP10586 1907 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 FXYD1O00168 92 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 B3GALT4O96024 378 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 IMPDH2P12268 514 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 GGT1P19440 569 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 MAP2K4P45985 399 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 TMEM115Q12893 351 aaPredicted RBP13.18□□□□□ -0.3
RAB3D-201ENST00000222120 DUOXA1Q1HG43 343 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 DEPDC1Q5TB30 811 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 P2RY8Q86VZ1 359 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 MCFD2Q8NI22 146 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 PAWRQ96IZ0 340 aaKnown RBP13.18□□□□□ -0.3
RAB3D-201ENST00000222120 ACPTQ9BZG2 426 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 NUAK2Q9H093 628 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 TNNI3P19429 210 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 HNMTP50135 292 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 AP1S2P56377 157 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.18□□□□□ -0.3
RAB3D-201ENST00000222120 ZDHHC20Q5W0Z9 365 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 ERICH5Q6P6B1 374 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 ZNF773Q6PK81 442 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 NANOGNBQ7Z5D8 188 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 CYP4Z1Q86W10 505 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 CLIP4Q8N3C7 705 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 IRF7Q92985 503 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 IL17FQ96PD4 163 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 TRIB3Q96RU7 358 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 CHCHD6Q9BRQ6 235 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 CCDC177Q9NQR7 707 aaPredicted RBP13.18□□□□□ -0.3
RAB3D-201ENST00000222120 CEPT1Q9Y6K0 416 aa13.18□□□□□ -0.3
RAB3D-201ENST00000222120 A0A0J9YVX5 310 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 NPPAP01160 153 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 SPINT3P49223 89 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 FAM26DQ5JW98 314 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 GALNT7Q86SF2 657 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 RAB2BQ8WUD1 216 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 HTRA1Q92743 480 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 FERD3LQ96RJ6 166 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 P2RY13Q9BPV8 354 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 PDFQ9HBH1 243 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 GIMAP4Q9NUV9 329 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 WDR70Q9NW82 654 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 FAM118AQ9NWS6 357 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 ELOVL2Q9NXB9 296 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 TRPS1Q9UHF7 1281 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 PTBP2Q9UKA9 531 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms