RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 A0A0G2JN53 185 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 TRBC2A0A5B9 178 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 EPOP01588 193 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 EBLN1P0CF75 366 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 ACVRL1P37023 503 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 SMSP52788 366 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 MC1RQ01726 317 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 MYLK3Q32MK0 819 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 PRPF38BQ5VTL8 546 aaKnown RBP13.22□□□□□ -0.29
SF3A1-201ENST00000215793 OR2L3Q8NG85 312 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 STON2Q8WXE9 905 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 TMBIM1Q969X1 311 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 SPATA9Q9BWV2 254 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 ZDHHC2Q9UIJ5 367 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 MEMO1Q9Y316 297 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 INSL6Q9Y581 213 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 UNCXA6NJT0 531 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 SCAMP1O15126 338 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 OR1I1O60431 355 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 NPPAP01160 153 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 RLN2P04090 185 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 STC1P52823 247 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 NRLP54845 237 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 RHDQ02161 417 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 ERI1Q8IV48 349 aaKnown RBP13.22□□□□□ -0.29
SF3A1-201ENST00000215793 SIPA1Q96FS4 1042 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 NPY6RQ99463 290 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 DPYSL5Q9BPU6 564 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 UPK3BL1B0FP48 263 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 UPK3BL2E5RIL1 263 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 TOR1BO14657 336 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 POP7O75817 140 aaKnown RBP13.22□□□□□ -0.29
SF3A1-201ENST00000215793 PRKCGP05129 697 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 ADH5P11766 374 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 GNSP15586 552 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 FPR1P21462 350 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 CLCNKAP51800 687 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 GPX6P59796 221 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 GPR17Q13304 367 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 FAM189A2Q15884 450 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 KIAA1161Q6NSJ0 714 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 EPGNQ6UW88 154 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 HFE2Q6ZVN8 426 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 SYVN1Q86TM6 617 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 SDR16C5Q8N3Y7 309 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 KCT2Q8NC54 265 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 ACOT12Q8WYK0 555 aa13.22□□□□□ -0.29
SF3A1-201ENST00000215793 ZNF487B1APH4 448 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 ZNF208O43345 1280 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 COQ9O75208 318 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 CXCR1P25024 350 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 ECHS1P30084 290 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 DGKQP52824 942 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 ZNF630Q2M218 657 aaPredicted RBP13.21□□□□□ -0.29
SF3A1-201ENST00000215793 PUS10Q3MIT2 529 aaKnown RBP13.21□□□□□ -0.29
SF3A1-201ENST00000215793 DNM1P34Q6PK57 102 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 THOC6Q86W42 341 aaKnown RBP13.21□□□□□ -0.29
SF3A1-201ENST00000215793 MMAAQ8IVH4 418 aaKnown RBP13.21□□□□□ -0.29
SF3A1-201ENST00000215793 RASGEF1AQ8N9B8 481 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 DCAF4L2Q8NA75 395 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 OR4F6Q8NGB9 312 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 TFGQ92734 400 aaPredicted RBP13.21□□□□□ -0.29
SF3A1-201ENST00000215793 TAMM41Q96BW9 452 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 ERMAPQ96PL5 475 aaPredicted RBP13.21□□□□□ -0.29
SF3A1-201ENST00000215793 EPYCQ99645 322 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 SLC39A3Q9BRY0 314 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 TRMT61BQ9BVS5 477 aaKnown RBP13.21□□□□□ -0.29
SF3A1-201ENST00000215793 SLC22A4Q9H015 551 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 ZNF639Q9UID6 485 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 BAIAP2Q9UQB8 552 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 EDDM13A0A1B0GTR0 161 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 CDC7O00311 574 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 KLK1P06870 262 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 MAP3K8P41279 467 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 SEMA3AQ14563 771 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 C2orf27AQ580R0 203 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 TXNDC8Q6A555 127 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 C7orf61Q8IZ16 206 aa13.21□□□□□ -0.29
SF3A1-201ENST00000215793 CELF5Q8N6W0 485 aaKnown RBP13.21□□□□□ -0.29
SF3A1-201ENST00000215793 ZNF317Q96PQ6 595 aaPredicted RBP13.21□□□□□ -0.29
SF3A1-201ENST00000215793 METTL21EPA6NDL7 271 aa13.21□□□□□ -0.3
SF3A1-201ENST00000215793 MANBAO00462 879 aa13.21□□□□□ -0.3
SF3A1-201ENST00000215793 ARL6IP5O75915 188 aa13.21□□□□□ -0.3
SF3A1-201ENST00000215793 NR2C1P13056 603 aa13.21□□□□□ -0.3
SF3A1-201ENST00000215793 KCNQ1P51787 676 aa13.21□□□□□ -0.3
SF3A1-201ENST00000215793 DCDC1P59894 354 aa13.21□□□□□ -0.3
SF3A1-201ENST00000215793 TLE2Q04725 743 aa13.21□□□□□ -0.3
SF3A1-201ENST00000215793 CNPY1Q3B7I2 92 aa13.21□□□□□ -0.3
SF3A1-201ENST00000215793 NAPRTQ6XQN6 538 aa13.21□□□□□ -0.3
SF3A1-201ENST00000215793 CLIP4Q8N3C7 705 aa13.21□□□□□ -0.3
SF3A1-201ENST00000215793 C1orf216Q8TAB5 229 aa13.21□□□□□ -0.3
SF3A1-201ENST00000215793 HCAR2Q8TDS4 363 aa13.21□□□□□ -0.3
SF3A1-201ENST00000215793 ZNF384Q8TF68 577 aa13.21□□□□□ -0.3
SF3A1-201ENST00000215793 MRM3Q9HC36 420 aaKnown RBP13.21□□□□□ -0.3
SF3A1-201ENST00000215793 ZBTB26Q9HCK0 441 aa13.21□□□□□ -0.3
SF3A1-201ENST00000215793 TNFRSF10DQ9UBN6 386 aa13.21□□□□□ -0.3
SF3A1-201ENST00000215793 PCDHGB5Q9Y5G0 923 aa13.21□□□□□ -0.3
SF3A1-201ENST00000215793 M0QX08 132 aa13.21□□□□□ -0.3
SF3A1-201ENST00000215793 CFHP08603 1231 aa13.21□□□□□ -0.3
SF3A1-201ENST00000215793 CCNHP51946 323 aaPredicted RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms