RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 RRP15Q9Y3B9 282 aaKnown RBP12.69□□□□□ -0.38
PHGDH-221ENST00000641573 IGSF10Q6WRI0 2623 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 KCNE1BA0A087WTH5 132 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 E7ENX8 843 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 MANBAO00462 879 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 FFAR3O14843 346 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 CLGNO14967 610 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 UBDO15205 165 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 GPR42O15529 346 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 PRAMEF4O60810 478 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 HNRNPCL1O60812 293 aaKnown RBP12.68□□□□□ -0.38
PHGDH-221ENST00000641573 TNFP01375 233 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 ESRRAP11474 423 aaPredicted RBP12.68□□□□□ -0.38
PHGDH-221ENST00000641573 LBPP18428 481 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 CALB2P22676 271 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 CD27P26842 260 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 AK4P27144 223 aaPredicted RBP12.68□□□□□ -0.38
PHGDH-221ENST00000641573 HALP42357 657 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 IRF8Q02556 426 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 TAP2Q03519 686 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 CHIT1Q13231 466 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 TSTA3Q13630 321 aaPredicted RBP12.68□□□□□ -0.38
PHGDH-221ENST00000641573 LRP8Q14114 963 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 FASTKQ14296 549 aaKnown RBP12.68□□□□□ -0.38
PHGDH-221ENST00000641573 NAA25Q14CX7 972 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 ABRAXAS2Q15018 415 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 USP39Q53GS9 565 aaKnown RBP12.68□□□□□ -0.38
PHGDH-221ENST00000641573 SOWAHCQ53LP3 525 aaPredicted RBP12.68□□□□□ -0.38
PHGDH-221ENST00000641573 PRAMEF9Q5VWM5 478 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 LRRC56Q8IYG6 542 aaPredicted RBP12.68□□□□□ -0.38
PHGDH-221ENST00000641573 LMNTD1Q8N9Z9 388 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 L3MBTL4Q8NA19 623 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 CADM4Q8NFZ8 388 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 OR2T11Q8NH01 316 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 FAM174AQ8TBP5 190 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 KLHDC7BQ96G42 594 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 SPACA7Q96KW9 195 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 IL17FQ96PD4 163 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 OR4K3Q96R72 315 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 SGPP1Q9BX95 441 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 TMEM168Q9H0V1 697 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 AASDHPPTQ9NRN7 309 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 GPR27Q9NS67 375 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 IMP3Q9NV31 184 aaKnown RBP12.68□□□□□ -0.38
PHGDH-221ENST00000641573 RIC8BQ9NVN3 520 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 TRNAU1APQ9NX07 287 aaKnown RBP12.68□□□□□ -0.38
PHGDH-221ENST00000641573 GPRC5BQ9NZH0 403 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 SPATA7Q9P0W8 599 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 GIMAP2Q9UG22 337 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 LNPEPQ9UIQ6 1025 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 KLK13Q9UKR3 277 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 DYRK1BQ9Y463 629 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 COPG1Q9Y678 874 aaKnown RBP12.68□□□□□ -0.38
PHGDH-221ENST00000641573 SLCO1B1Q9Y6L6 691 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 DGKBQ9Y6T7 804 aa12.68□□□□□ -0.38
PHGDH-221ENST00000641573 ZFC3H1O60293 1989 aaKnown RBP12.68□□□□□ -0.38
PHGDH-221ENST00000641573 ASH1LQ9NR48 2969 aaKnown RBP12.68□□□□□ -0.38
PHGDH-221ENST00000641573 ANKRD12Q6UB98 2062 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 E7EQ34 232 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 SLC22A2O15244 555 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 ULK1O75385 1050 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 DNAJC8O75937 253 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-221ENST00000641573 KRT6AP02538 564 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 KRT6BP04259 564 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 PRR35P0CG20 571 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 JUPP14923 745 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 PIK3R1P27986 724 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 PRDX6P30041 224 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 ADSLP30566 484 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-221ENST00000641573 HSD17B2P37059 387 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 ACTR1BP42025 376 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 KRT6CP48668 564 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 CORO7P57737 925 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 ACTR1AP61163 376 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 RPL6Q02878 288 aaKnown RBP12.67□□□□□ -0.38
PHGDH-221ENST00000641573 PCDH1Q08174 1060 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 EIF2B5Q13144 721 aaKnown RBP12.67□□□□□ -0.38
PHGDH-221ENST00000641573 FZD2Q14332 565 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 KRT33BQ14525 404 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 SQLEQ14534 574 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 ARHGAP19Q14CB8 494 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 TCEA2Q15560 299 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 RPE65Q16518 533 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 CPSF6Q16630 551 aaKnown RBP eCLIP12.67□□□□□ -0.38
PHGDH-221ENST00000641573 SGO1Q5FBB7 561 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 XKR6Q5GH73 641 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 LIPJQ5W064 366 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 C19orf48Q6RUI8 117 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 WASH2PQ6VEQ5 465 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 SLC36A4Q6YBV0 504 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 RNF165Q6ZSG1 346 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 PROSER1Q86XN7 944 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 CCL4L1Q8NHW4 92 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 CAMK1GQ96NX5 476 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 MVB12BQ9H7P6 319 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 WASH6PQ9NQA3 447 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 CCDC177Q9NQR7 707 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-221ENST00000641573 SCHIP1Q9P0W5 487 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-221ENST00000641573 TBC1D29Q9UFV1 150 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 ZNF490Q9ULM2 529 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms