RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 PEX11AO75192 247 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 RSL1D1O76021 490 aaKnown RBP7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 WFS1O76024 890 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 C1GALT1C1LP0DN25 315 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 COX4I1P13073 169 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 F3P13726 295 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 HSD3B1P14060 373 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 NPPBP16860 134 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 CXCR2P25025 360 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 HSD3B2P26439 372 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 AK4P27144 223 aaPredicted RBP7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 PIK3R1P27986 724 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 PTPN4P29074 926 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 PKLRP30613 574 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 ACADVLP49748 655 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 HTR6P50406 440 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 RAB28P51157 221 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 EMX2Q04743 252 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 CSTF3Q12996 717 aaKnown RBP7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 GRIK2Q13002 908 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 EIF2B5Q13144 721 aaKnown RBP7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 TSTA3Q13630 321 aaPredicted RBP7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 CYLC2Q14093 348 aaPredicted RBP7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 FASTKQ14296 549 aaKnown RBP7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 KIR2DS5Q14953 304 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 ABRAXAS2Q15018 415 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 RPS6KA2Q15349 733 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 SPRED3Q2MJR0 410 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 KIF19Q2TAC6 998 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 TCHHL1Q5QJ38 904 aaPredicted RBP7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 FRG2Q64ET8 278 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 DUS1LQ6P1R4 473 aaKnown RBP7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 SLC30A9Q6PML9 568 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 SCIMPQ6UWF3 145 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 NXPE4Q6UWF7 544 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 SLCO4C1Q6ZQN7 724 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 ASRGL1Q7L266 308 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 C17orf64Q86WR6 236 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 NRROSQ86YC3 692 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 PHACTR4Q8IZ21 702 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 MIER2Q8N344 545 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 SFRP1Q8N474 314 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 FNDC5Q8NAU1 212 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 AVL9Q8NBF6 648 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 RP9Q8TA86 221 aaKnown RBP7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 ZFPM2Q8WW38 1151 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 SLC5A11Q8WWX8 675 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 SELENOMQ8WWX9 145 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 DNASE2BQ8WZ79 361 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 NEIL2Q969S2 332 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 UBE2E3Q969T4 207 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 SH3KBP1Q96B97 665 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 CXorf40BQ96DE9 158 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 MARK4Q96L34 752 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 HSPA12BQ96MM6 686 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 RAB3IPQ96QF0 476 aaPredicted RBP7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 FRG2BQ96QU4 278 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 MENTQ9BUN1 341 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 PITHD1Q9GZP4 211 aaPredicted RBP7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 PELI2Q9HAT8 420 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 BRF2Q9HAW0 419 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 TM9SF3Q9HD45 589 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 PRMT8Q9NR22 394 aaPredicted RBP7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 TMEM45AQ9NWC5 275 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 NOP53Q9NZM5 478 aaKnown RBP7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 APOBEC3BQ9UH17 382 aaKnown RBP7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 ADGRE2Q9UHX3 823 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 PNMA8BQ9ULN7 279 aaPredicted RBP7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 PLAGL1Q9UM63 463 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 G3BP2Q9UN86 482 aaKnown RBP7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 PTGDR2Q9Y5Y4 395 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 F5P12259 2224 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 BDP1A6H8Y1 2624 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 A6NCN8 305 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 TMEM221A6NGB7 291 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 NPIPB8E9PQR5 432 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 M0R296 226 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 SCAMP1O15126 338 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 GYG2O15488 501 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 GFRA3O60609 400 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 PRAMEF4O60810 478 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 CCNDBP1O95273 360 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 PDYNP01213 254 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 CSF2P04141 144 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 ALDOCP09972 364 aaKnown RBP7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 ACPPP15309 386 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 NME1P15531 152 aaKnown RBP7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 JUNDP17535 347 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 XRCC1P18887 633 aaPredicted RBP7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 BCKDHBP21953 392 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 PRPH2P23942 346 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 HRH2P25021 359 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 SERPINB1P30740 379 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 SHMT2P34897 504 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 C21orf59P57076 290 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 PHEXP78562 749 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 ABATP80404 500 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 MXRA7P84157 204 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 STX5Q13190 355 aa7.28□□□□□ -1.24
PTP4A1-206ENST00000627002 SLBPQ14493 270 aaKnown RBP eCLIP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms