RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 HNRNPA1L2Q32P51 320 aaKnown RBP9□□□□□ -0.97
GGA3-223ENST00000621870 SLC9B1Q4ZJI4 515 aa9□□□□□ -0.97
GGA3-223ENST00000621870 TOR1AIP1Q5JTV8 583 aa9□□□□□ -0.97
GGA3-223ENST00000621870 SMYD5Q6GMV2 418 aa9□□□□□ -0.97
GGA3-223ENST00000621870 OR4F3Q6IEY1 312 aa9□□□□□ -0.97
GGA3-223ENST00000621870 LRRC70Q7Z2Q7 622 aa9□□□□□ -0.97
GGA3-223ENST00000621870 GALNT5Q7Z7M9 940 aa9□□□□□ -0.97
GGA3-223ENST00000621870 TBC1D21Q8IYX1 336 aa9□□□□□ -0.97
GGA3-223ENST00000621870 MMABQ96EY8 250 aaPredicted RBP9□□□□□ -0.97
GGA3-223ENST00000621870 TAPBPLQ9BX59 468 aa9□□□□□ -0.97
GGA3-223ENST00000621870 RASSF1Q9NS23 344 aa9□□□□□ -0.97
GGA3-223ENST00000621870 GPR34Q9UPC5 381 aa9□□□□□ -0.97
GGA3-223ENST00000621870 CAB39Q9Y376 341 aaPredicted RBP9□□□□□ -0.97
GGA3-223ENST00000621870 TESMINQ9Y4I5 508 aa9□□□□□ -0.97
GGA3-223ENST00000621870 CACNA1EQ15878 2313 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 PNMA8CA0A1B0GUJ8 204 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 SMIM31A0A1B0GVY4 71 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 FAM221BA6H8Z2 402 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 OR6C74A6NCV1 312 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 TP73O15350 636 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 STX11O75558 287 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 WFS1O76024 890 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 POU2F1P14859 743 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 ADSLP30566 484 aaPredicted RBP8.99□□□□□ -0.97
GGA3-223ENST00000621870 SLC7A1P30825 629 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 SHMT2P34897 504 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 DPY19L1Q2PZI1 675 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 PLD6Q8N2A8 252 aaKnown RBP8.99□□□□□ -0.97
GGA3-223ENST00000621870 TRAM1L1Q8N609 369 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 C2CD4AQ8NCU7 369 aaPredicted RBP8.99□□□□□ -0.97
GGA3-223ENST00000621870 ZNF540Q8NDQ6 660 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 OR5M3Q8NGP4 307 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 FCRL3Q96P31 734 aaPredicted RBP8.99□□□□□ -0.97
GGA3-223ENST00000621870 KCNA7Q96RP8 456 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 DERL2Q9GZP9 239 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 SLITRK2Q9H156 845 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 GIMAP2Q9UG22 337 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 MRPS7Q9Y2R9 242 aaKnown RBP8.99□□□□□ -0.97
GGA3-223ENST00000621870 MARF1Q9Y4F3 1742 aaKnown RBP8.99□□□□□ -0.97
GGA3-223ENST00000621870 FAM86C2PA6NEL3 165 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 hCG_2039718K7EN88 272 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 XKRYO14609 159 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 TRIM24O15164 1050 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 ZNF217O75362 1048 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 AP2A2O94973 939 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 MYCLP1P12525 358 aaPredicted RBP8.99□□□□□ -0.97
GGA3-223ENST00000621870 BPIP17213 487 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 CLCN7P51798 805 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.99□□□□□ -0.97
GGA3-223ENST00000621870 LGALS3BPQ08380 585 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 TANGO2Q6ICL3 276 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 KLHDC10Q6PID8 442 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 DEPDC4Q8N2C3 294 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 SUN3Q8TAQ9 357 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 DGAT2Q96PD7 388 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 OR52B2Q96RD2 323 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 RETREG1Q9H6L5 497 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 NOL6Q9H6R4 1146 aaKnown RBP8.99□□□□□ -0.97
GGA3-223ENST00000621870 CALML5Q9NZT1 146 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 IKZF2Q9UKS7 526 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 HCN2Q9UL51 889 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 DLGAP4Q9Y2H0 992 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 SPTAN1Q13813 2472 aaKnown RBP8.99□□□□□ -0.97
GGA3-223ENST00000621870 PRSS56P0CW18 603 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 SLC6A4P31645 630 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 SLC6A11P48066 632 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 DUSP3P51452 185 aaPredicted RBP8.99□□□□□ -0.97
GGA3-223ENST00000621870 CLDN2P57739 230 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 MYBPC1Q00872 1141 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 RAPSNQ13702 412 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 NFE2L1Q14494 772 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 DEFB134Q4QY38 66 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 FAM78AQ5JUQ0 283 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 PAQR9Q6ZVX9 377 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 GOLGA7Q7Z5G4 137 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 PROSER1Q86XN7 944 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 PGAM4Q8N0Y7 254 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 OR8H2Q8N162 312 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 MR1Q95460 341 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 KIAA1143Q96AT1 154 aaPredicted RBP8.99□□□□□ -0.97
GGA3-223ENST00000621870 DPH7Q9BTV6 452 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 KLF16Q9BXK1 252 aaPredicted RBP8.99□□□□□ -0.97
GGA3-223ENST00000621870 REXO4Q9GZR2 422 aaKnown RBP8.99□□□□□ -0.97
GGA3-223ENST00000621870 ZDHHC2Q9UIJ5 367 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 ERGIC3Q9Y282 383 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 AK5Q9Y6K8 562 aa8.99□□□□□ -0.97
GGA3-223ENST00000621870 NAV1Q8NEY1 1877 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 A0A087WXM4 84 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 PRMT3O60678 531 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 GJA4P35212 333 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 CDH12P55289 794 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 NRG3P56975 720 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 TMEM31Q5JXX7 168 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 PLEKHS1Q5SXH7 462 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 REP15Q6BDI9 236 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 GALNT18Q6P9A2 607 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 GAREM2Q75VX8 874 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 FAM220AQ7Z4H9 259 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 OR9I1Q8NGQ6 314 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 C6orf62Q9GZU0 229 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms