RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 SMARCD2Q92925 531 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 CLPTM1LQ96KA5 538 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 CEP295NLQ96MC4 621 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 CIB1Q99828 191 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 C8orf33Q9H7E9 229 aaPredicted RBP11.1□□□□□ -0.63
CLIP1-219ENST00000620786 IL21RQ9HBE5 538 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 SPATA7Q9P0W8 599 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 B4GALT6Q9UBX8 382 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 NPIPA1Q9UND3 350 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 FADS3Q9Y5Q0 445 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 A0A0D9SEW6 157 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 FAM234BA2RU67 622 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 MYADML2A6NDP7 307 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 C2orf74A8MZ97 194 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 PIRO00625 290 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 LDB2O43679 373 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 CPNE3O75131 537 aaKnown RBP11.1□□□□□ -0.63
CLIP1-219ENST00000620786 THRBP10828 461 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 IMPDH1P20839 514 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 HSD11B1P28845 292 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 PRDX6P30041 224 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 OXTRP30559 389 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 NR1H2P55055 460 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 PON2Q15165 354 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 CAND1Q86VP6 1230 aaKnown RBP11.1□□□□□ -0.63
CLIP1-219ENST00000620786 PQLC1Q8N2U9 271 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 HM13Q8TCT9 377 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 NKD1Q969G9 470 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 ZNF347Q96SE7 839 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 C16orf70Q9BSU1 422 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 GPR62Q9BZJ7 368 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 NSUN3Q9H649 340 aaKnown RBP11.1□□□□□ -0.63
CLIP1-219ENST00000620786 OAS1P00973 400 aaKnown RBP11.1□□□□□ -0.63
CLIP1-219ENST00000620786 RAB8AP61006 207 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 ARSJQ5FYB0 599 aaPredicted RBP11.1□□□□□ -0.63
CLIP1-219ENST00000620786 LPCAT4Q643R3 524 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 CLNKQ7Z7G1 428 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 TRIM74Q86UV6 250 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 PIM3Q86V86 326 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 ZDHHC21Q8IVQ6 265 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 DCUN1D3Q8IWE4 304 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 PNPLA2Q96AD5 504 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 OR2M4Q96R27 311 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 C8orf4Q9NR00 106 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 FTSJ1Q9UET6 329 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 SPIN1Q9Y657 262 aaPredicted RBP11.1□□□□□ -0.63
CLIP1-219ENST00000620786 HMGCS1Q01581 520 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 LMAN2Q12907 356 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 DLG1Q12959 904 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 IL22RA1Q8N6P7 574 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 FAM47BQ8NA70 645 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 S100A14Q9HCY8 104 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 HRASLS2Q9NWW9 162 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 SALL4Q9UJQ4 1053 aa11.1□□□□□ -0.63
CLIP1-219ENST00000620786 FAM149AA5PLN7 773 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 ANXA2P2A6NMY6 339 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 VEGFDO43915 354 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 TIMP1P01033 207 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 ANXA2P07355 339 aaKnown RBP11.09□□□□□ -0.63
CLIP1-219ENST00000620786 FHP07954 510 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 C8orf89P0DMQ9 161 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 PRPS1L1P21108 318 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 GPRC6AQ5T6X5 926 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 FRG2Q64ET8 278 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 NATD1Q8N6N6 113 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 PROKR2Q8NFJ6 384 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 OR9A1PQ8NGU1 263 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 DNAJB8Q8NHS0 232 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 FRG2BQ96QU4 278 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 SUSD2Q9UGT4 822 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 PLK4O00444 970 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 TRIM3O75382 744 aaPredicted RBP11.09□□□□□ -0.63
CLIP1-219ENST00000620786 SNX4O95219 450 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 JUNP05412 331 aaKnown RBP11.09□□□□□ -0.63
CLIP1-219ENST00000620786 GRIA2P42262 883 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 SERINC3Q13530 473 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 ZNF852Q6ZMS4 543 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 SVOPLQ8N434 492 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 DHRS1Q96LJ7 313 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 WDR92Q96MX6 357 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 EPYCQ99645 322 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 SSU72Q9NP77 194 aaKnown RBP11.09□□□□□ -0.63
CLIP1-219ENST00000620786 TVP23BQ9NYZ1 205 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 ATXN10Q9UBB4 475 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 NALCNQ8IZF0 1738 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.09□□□□□ -0.63
CLIP1-219ENST00000620786 MUSKO15146 869 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 SYPP08247 313 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 SHMT2P34897 504 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 PREPP48147 710 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 ERVK-8P63133 956 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 KCTD21Q4G0X4 260 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 METTL21CQ5VZV1 264 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 LRRC17Q8N6Y2 441 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 NKIRAS2Q9NYR9 191 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 C10orf71Q711Q0 1435 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 HYKKA2RU49 373 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 WRBO00258 174 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 SLC30A4O14863 429 aa11.09□□□□□ -0.63
CLIP1-219ENST00000620786 GPR32O75388 356 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms