RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 EIF3FO00303 357 aaPredicted RBP7.54□□□□□ -1.2
NEK3-207ENST00000617054 ANKRD28O15084 1053 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 SLC16A5O15375 505 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 VEGFDO43915 354 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 VPS4BO75351 444 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 TGFB1P01137 390 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 KRT6AP02538 564 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 KRT6BP04259 564 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 GSNP06396 782 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 CEACAM5P06731 702 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 TRIM23P36406 574 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 KRT6CP48668 564 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 CDKL1Q00532 357 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 SP140Q13342 867 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 RCAN2Q14206 197 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 SELPLGQ14242 412 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 CLCA4Q14CN2 919 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 KIAA0040Q15053 153 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 MAPRE2Q15555 327 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 C6orf10Q5SRN2 563 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 FRG2Q64ET8 278 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 ANO7Q6IWH7 933 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 NEK10Q6ZWH5 1172 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 TRIM46Q7Z4K8 759 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 PLD3Q8IV08 490 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 KIAA2013Q8IYS2 634 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 ENDOVQ8N8Q3 282 aaKnown RBP7.54□□□□□ -1.2
NEK3-207ENST00000617054 OR9A1PQ8NGU1 263 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 FRG2BQ96QU4 278 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 C1QTNF2Q9BXJ5 285 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 TEX101Q9BY14 249 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 BRINP2Q9C0B6 783 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 UBE2ZQ9H832 354 aaPredicted RBP7.54□□□□□ -1.2
NEK3-207ENST00000617054 FGF22Q9HCT0 170 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 S100A14Q9HCY8 104 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 SPAG4Q9NPE6 437 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 CMTM6Q9NX76 183 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 NOP53Q9NZM5 478 aaKnown RBP7.54□□□□□ -1.2
NEK3-207ENST00000617054 V9GYQ6 96 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 A0A1W2PP18 115 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 FEZF1A0PJY2 475 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 AP1G1O43747 822 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 EML2O95834 649 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 MTHFD1P11586 935 aaKnown RBP7.54□□□□□ -1.2
NEK3-207ENST00000617054 SLC6A2P23975 617 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 MTPNP58546 118 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 PHC1P78364 1004 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 SLC34A1Q06495 639 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 TLR1Q15399 786 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 PGS1Q32NB8 556 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 GTDC1Q4AE62 458 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 ENPP7Q6UWV6 458 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 EFL1Q7Z2Z2 1120 aaKnown RBP7.54□□□□□ -1.2
NEK3-207ENST00000617054 RASGRP3Q8IV61 690 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 SFTPA2Q8IWL1 248 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 SLC15A3Q8IY34 581 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 KIRREL3Q8IZU9 778 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 HM13Q8TCT9 377 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 PDXPQ96GD0 296 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 AURKBQ96GD4 344 aaPredicted RBP7.54□□□□□ -1.2
NEK3-207ENST00000617054 C12orf66Q96MD2 445 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 INSM2Q96T92 566 aaPredicted RBP7.54□□□□□ -1.2
NEK3-207ENST00000617054 EPHX3Q9H6B9 360 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 C1orf109Q9NX04 203 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 SCHIP1Q9P0W5 487 aaPredicted RBP7.54□□□□□ -1.2
NEK3-207ENST00000617054 SNX6Q9UNH7 406 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 DENND4AQ7Z401 1863 aa7.54□□□□□ -1.2
NEK3-207ENST00000617054 ACOT8O14734 319 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 ICMTO60725 284 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 GABRG2P18507 467 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 ATP4BP51164 291 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 CYP4F2P78329 520 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 CCINQ13939 588 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 MLF2Q15773 248 aaPredicted RBP7.53□□□□□ -1.2
NEK3-207ENST00000617054 METRNLQ641Q3 311 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 HORMAD1Q86X24 394 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 KBTBD2Q8IY47 623 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 TCAIMQ8N3R3 496 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 L3MBTL4Q8NA19 623 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 PCYOX1LQ8NBM8 494 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 OR7G3Q8NG95 312 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 HUS1BQ8NHY5 278 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 STON2Q8WXE9 905 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 PPP3R2Q96LZ3 170 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 FERD3LQ96RJ6 166 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 GAS2L1Q99501 681 aaPredicted RBP7.53□□□□□ -1.2
NEK3-207ENST00000617054 SERPINI1Q99574 410 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 APOOQ9BUR5 198 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 SORBS1Q9BX66 1292 aaKnown RBP7.53□□□□□ -1.2
NEK3-207ENST00000617054 TPSD1Q9BZJ3 242 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 DPY30Q9C005 99 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 CARS2Q9HA77 564 aaKnown RBP7.53□□□□□ -1.2
NEK3-207ENST00000617054 PRDM6Q9NQX0 595 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 TMEM181Q9P2C4 612 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 STX18Q9P2W9 335 aaKnown RBP7.53□□□□□ -1.2
NEK3-207ENST00000617054 CYP8B1Q9UNU6 501 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 ARHGEF17Q96PE2 2063 aaPredicted RBP7.53□□□□□ -1.2
NEK3-207ENST00000617054 PDZK1P1A8MUH7 402 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 H3BNX3 289 aa7.53□□□□□ -1.2
NEK3-207ENST00000617054 SLC28A1O00337 649 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms