RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	TJP1	Q07157	1748 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	EVPL	Q92817	2033 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	KLHL33	A6NCF5	533 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	MT-ND2	P03891	347 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	DNAJA1	P31689	397 aa	Known RBP	13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	RPL4	P36578	427 aa	Known RBP	13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	BDKRB1	P46663	353 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	SCAP	Q12770	1279 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	GRB14	Q14449	540 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	SLBP	Q14493	270 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	TAZ	Q16635	292 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	RBM48	Q5RL73	367 aa	Known RBP	13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	TPRG1L	Q5T0D9	272 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	SCD5	Q86SK9	330 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	PDPR	Q8NCN5	879 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	FUBP1	Q96AE4	644 aa	Known RBP	13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	C11orf24	Q96F05	449 aa	Predicted RBP	13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	RANBP9	Q96S59	729 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	SLC35A5	Q9BS91	424 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	CLEC4M	Q9H2X3	399 aa	Predicted RBP	13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	SUV39H2	Q9H5I1	410 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	C14orf119	Q9NWQ9	140 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	VPS51	Q9UID3	782 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	GJD2	Q9UKL4	321 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	SPIN1	Q9Y657	262 aa	Predicted RBP	13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	IQCM	A0A1B0GVH7	501 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571		A0A1W2PRB8	838 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	SSNA1	O43805	119 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	POP4	O95707	220 aa	Known RBP	13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	MAGEA6	P43360	314 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	KCNC1	P48547	511 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	TST	Q16762	297 aa	Known RBP	13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	LETMD1	Q6P1Q0	360 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	LSMEM2	Q8N112	164 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	ZNF433	Q8N7K0	673 aa	Predicted RBP	13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	KCNJ9	Q92806	393 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	NARS2	Q96I59	477 aa	Known RBP	13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	ZNF641	Q96N77	438 aa	Predicted RBP	13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	PTBP2	Q9UKA9	531 aa	Known RBP	13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	RASAL1	O95294	804 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	PAPSS2	O95340	614 aa	Predicted RBP	13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	IFI30	P13284	250 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	CD47	Q08722	323 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	FLCN	Q8NFG4	579 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	CD99L2	Q8TCZ2	262 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	PSKH2	Q96QS6	385 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	ZDHHC4	Q9NPG8	344 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	DNAJC27	Q9NZQ0	273 aa		13.49	□□□□□ -0.25
MUC1-223	ENST00000611571	FBP2	O00757	339 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	CHRNA1	P02708	482 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	C8B	P07358	591 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	ALDOC	P09972	364 aa	Known RBP	13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	CKMT1A	P12532	417 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	CCND3	P30281	292 aa	Predicted RBP	13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	MAT2A	P31153	395 aa	Known RBP	13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	CAPZA2	P47755	286 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	ATP6AP1	Q15904	470 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	LAPTM4B	Q86VI4	370 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	MINDY1	Q8N5J2	469 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	DTX3	Q8N9I9	347 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	KCT2	Q8NC54	265 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	MAL2	Q969L2	176 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	GAL3ST1	Q99999	423 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	OR51V1	Q9H2C8	321 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	FLRT1	Q9NZU1	646 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	NDOR1	Q9UHB4	597 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	GLOD5	A6NK44	160 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	GNB5	O14775	395 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	SLC22A1	O15245	554 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	SAG	P10523	405 aa	Predicted RBP	13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	ARRB2	P32121	409 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	TGM3	Q08188	693 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	NFATC3	Q12968	1075 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	ATP13A5	Q4VNC0	1218 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	ARSI	Q5FYB1	569 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	UBXN11	Q5T124	520 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	ARHGAP12	Q8IWW6	846 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	NFKBID	Q8NI38	313 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	LHPP	Q9H008	270 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	GULP1	Q9UBP9	304 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	RIMKLB	Q9ULI2	386 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	FAM186A	A6NE01	2351 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	FABP12	A6NFH5	140 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	GRM6	O15303	877 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	BMX	P51813	675 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	RAPSN	Q13702	412 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	IER5L	Q5T953	404 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	KIAA0319	Q5VV43	1072 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	PM20D1	Q6GTS8	502 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	KIAA1161	Q6NSJ0	714 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	HOMEZ	Q8IX15	550 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	ZFP3	Q96NJ6	502 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	FAIM2	Q9BWQ8	316 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	KRCC1	Q9NPI7	259 aa	Predicted RBP	13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	NLE1	Q9NVX2	485 aa	Predicted RBP	13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	VAPA	Q9P0L0	249 aa		13.48	□□□□□ -0.25
MUC1-223	ENST00000611571	CNMD	O75829	334 aa		13.47	□□□□□ -0.25
MUC1-223	ENST00000611571	EOMES	O95936	686 aa		13.47	□□□□□ -0.25
MUC1-223	ENST00000611571	RPN2	P04844	631 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms