RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 LINC00303Q3SY05 128 aa15.11■□□□□ 0.01
RPS28-203ENST00000600659 GLE1Q53GS7 698 aaKnown RBP15.11■□□□□ 0.01
RPS28-203ENST00000600659 ATP1A1-AS1Q5TC04 95 aa15.11■□□□□ 0.01
RPS28-203ENST00000600659 ICE2Q659A1 982 aa15.11■□□□□ 0.01
RPS28-203ENST00000600659 MCATQ8IVS2 390 aaKnown RBP15.11■□□□□ 0.01
RPS28-203ENST00000600659 SYTL1Q8IYJ3 562 aa15.11■□□□□ 0.01
RPS28-203ENST00000600659 FBF1Q8TES7 1133 aa15.11■□□□□ 0.01
RPS28-203ENST00000600659 FAM129AQ9BZQ8 928 aa15.11■□□□□ 0.01
RPS28-203ENST00000600659 CHST8Q9H2A9 424 aa15.11■□□□□ 0.01
RPS28-203ENST00000600659 CAB39LQ9H9S4 337 aa15.11■□□□□ 0.01
RPS28-203ENST00000600659 CUEDC1Q9NWM3 386 aaPredicted RBP15.11■□□□□ 0.01
RPS28-203ENST00000600659 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.11■□□□□ 0.01
RPS28-203ENST00000600659 SERTAD3Q9UJW9 196 aa15.11■□□□□ 0.01
RPS28-203ENST00000600659 COL6A6A6NMZ7 2263 aa15.11■□□□□ 0.01
RPS28-203ENST00000600659 PIEZO2Q9H5I5 2752 aa15.1■□□□□ 0.01
RPS28-203ENST00000600659 ERVH48-1M5A8F1 160 aa15.1■□□□□ 0.01
RPS28-203ENST00000600659 CDC7O00311 574 aa15.1■□□□□ 0.01
RPS28-203ENST00000600659 ZSCAN9O15535 394 aaPredicted RBP15.1■□□□□ 0.01
RPS28-203ENST00000600659 OR2B3O76000 313 aa15.1■□□□□ 0.01
RPS28-203ENST00000600659 MED26O95402 600 aa15.1■□□□□ 0.01
RPS28-203ENST00000600659 FURINP09958 794 aa15.1■□□□□ 0.01
RPS28-203ENST00000600659 GMPRP36959 345 aa15.1■□□□□ 0.01
RPS28-203ENST00000600659 CSRP3P50461 194 aa15.1■□□□□ 0.01
RPS28-203ENST00000600659 PTCHD3Q3KNS1 767 aa15.1■□□□□ 0.01
RPS28-203ENST00000600659 CRTC2Q53ET0 693 aaPredicted RBP15.1■□□□□ 0.01
RPS28-203ENST00000600659 FRMPD2BQ6IN97 320 aa15.1■□□□□ 0.01
RPS28-203ENST00000600659 RHBDD2Q6NTF9 364 aa15.1■□□□□ 0.01
RPS28-203ENST00000600659 FBXO42Q6P3S6 717 aa15.1■□□□□ 0.01
RPS28-203ENST00000600659 PAQR7Q86WK9 346 aa15.1■□□□□ 0.01
RPS28-203ENST00000600659 ZNF655Q8N720 491 aaPredicted RBP15.1■□□□□ 0.01
RPS28-203ENST00000600659 CEP112Q8N8E3 955 aa15.1■□□□□ 0.01
RPS28-203ENST00000600659 CDKL2Q92772 493 aa15.1■□□□□ 0.01
RPS28-203ENST00000600659 KIAA1143Q96AT1 154 aaPredicted RBP15.1■□□□□ 0.01
RPS28-203ENST00000600659 CCDC138Q96M89 665 aa15.1■□□□□ 0.01
RPS28-203ENST00000600659 GBP5Q96PP8 586 aa15.1■□□□□ 0.01
RPS28-203ENST00000600659 PLCD4Q9BRC7 762 aa15.1■□□□□ 0.01
RPS28-203ENST00000600659 DPH7Q9BTV6 452 aa15.1■□□□□ 0.01
RPS28-203ENST00000600659 FUT8Q9BYC5 575 aa15.1■□□□□ 0.01
RPS28-203ENST00000600659 POPDC3Q9HBV1 291 aa15.1■□□□□ 0.01
RPS28-203ENST00000600659 INTS7Q9NVH2 962 aaKnown RBP15.1■□□□□ 0.01
RPS28-203ENST00000600659 NUP210LQ5VU65 1888 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 LOC105369274A0A096LPK9 316 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 LOC102723532A0A0G2JNH3 316 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 HMX2A2RU54 273 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 FITM1A5D6W6 292 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 ZNF839A8K0R7 811 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 ZNF891A8MT65 544 aaPredicted RBP15.09■□□□□ 0.01
RPS28-203ENST00000600659 C21orf140B9A014 251 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 MAP3K7O43318 606 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 CCNYL3P0C7X3 344 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 TCN2P20062 427 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 SAT1P21673 171 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 CMPK1P30085 196 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 STX2P32856 288 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 RPA3P35244 121 aaPredicted RBP15.09■□□□□ 0.01
RPS28-203ENST00000600659 RPS18P62269 152 aaKnown RBP15.09■□□□□ 0.01
RPS28-203ENST00000600659 NFKB2Q00653 900 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 POU4F1Q01851 419 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 CDC20Q12834 499 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 AGTRAPQ6RW13 159 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 TMEM151BQ8IW70 566 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 OR4N4Q8N0Y3 316 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 PPM1NQ8N819 430 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 MCOLN3Q8TDD5 553 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 ANKRD7Q92527 254 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 CLIP3Q96DZ5 547 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 EFHD1Q9BUP0 239 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 SGPP1Q9BX95 441 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 SEMA4CQ9C0C4 833 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 CDC42EP4Q9H3Q1 356 aaKnown RBP15.09■□□□□ 0.01
RPS28-203ENST00000600659 L2HGDHQ9H9P8 463 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 MRPS30Q9NP92 439 aaKnown RBP15.09■□□□□ 0.01
RPS28-203ENST00000600659 SLC22A11Q9NSA0 550 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 ANKMY1Q9P2S6 941 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 DHCR7Q9UBM7 475 aaKnown RBP15.09■□□□□ 0.01
RPS28-203ENST00000600659 AP1M2Q9Y6Q5 423 aa15.09■□□□□ 0.01
RPS28-203ENST00000600659 SPENQ96T58 3664 aaKnown RBP15.09■□□□□ 0.01
RPS28-203ENST00000600659 BOD1L1Q8NFC6 3051 aa15.08■□□□□ 0
RPS28-203ENST00000600659 A0A0J9YVX5 310 aa15.08■□□□□ 0
RPS28-203ENST00000600659 NPEPPSL1A6NEC2 478 aa15.08■□□□□ 0
RPS28-203ENST00000600659 PHGDHO43175 533 aaKnown RBP15.08■□□□□ 0
RPS28-203ENST00000600659 CNOT3O75175 753 aaKnown RBP15.08■□□□□ 0
RPS28-203ENST00000600659 AP1S2P56377 157 aa15.08■□□□□ 0
RPS28-203ENST00000600659 SNRPNP63162 240 aaKnown RBP15.08■□□□□ 0
RPS28-203ENST00000600659 NAB1Q13506 487 aa15.08■□□□□ 0
RPS28-203ENST00000600659 TSTA3Q13630 321 aaPredicted RBP15.08■□□□□ 0
RPS28-203ENST00000600659 IL10RAQ13651 578 aa15.08■□□□□ 0
RPS28-203ENST00000600659 TSNQ15631 228 aaKnown RBP15.08■□□□□ 0
RPS28-203ENST00000600659 TBR1Q16650 682 aa15.08■□□□□ 0
RPS28-203ENST00000600659 ZC3H12BQ5HYM0 836 aaKnown RBP15.08■□□□□ 0
RPS28-203ENST00000600659 FAM69BQ5VUD6 431 aa15.08■□□□□ 0
RPS28-203ENST00000600659 TLDC1Q6P9B6 456 aa15.08■□□□□ 0
RPS28-203ENST00000600659 CTAGE3PQ8IX95 158 aa15.08■□□□□ 0
RPS28-203ENST00000600659 GPR135Q8IZ08 494 aa15.08■□□□□ 0
RPS28-203ENST00000600659 ARHGEF39Q8N4T4 335 aa15.08■□□□□ 0
RPS28-203ENST00000600659 DTWD1Q8N5C7 304 aa15.08■□□□□ 0
RPS28-203ENST00000600659 NKAPQ8N5F7 415 aaKnown RBP15.08■□□□□ 0
RPS28-203ENST00000600659 EXTL1Q92935 676 aa15.08■□□□□ 0
RPS28-203ENST00000600659 MR1Q95460 341 aa15.08■□□□□ 0
RPS28-203ENST00000600659 OR4K3Q96R72 315 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms