RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 SNRPAP09012 282 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-214ENST00000597396 CCND1P24385 295 aa18.91■□□□□ 0.62
SHKBP1-214ENST00000597396 SLC26A3P40879 764 aa18.91■□□□□ 0.62
SHKBP1-214ENST00000597396 GRIA3P42263 894 aa18.91■□□□□ 0.62
SHKBP1-214ENST00000597396 COL28A1Q2UY09 1125 aa18.91■□□□□ 0.62
SHKBP1-214ENST00000597396 DEFB110Q30KQ9 67 aa18.91■□□□□ 0.62
SHKBP1-214ENST00000597396 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.91■□□□□ 0.62
SHKBP1-214ENST00000597396 PRAMEF13Q5VWM6 474 aa18.91■□□□□ 0.62
SHKBP1-214ENST00000597396 LRRC69Q6ZNQ3 347 aa18.91■□□□□ 0.62
SHKBP1-214ENST00000597396 ZUFSPQ96AP4 578 aa18.91■□□□□ 0.62
SHKBP1-214ENST00000597396 ZNF501Q96CX3 271 aaPredicted RBP18.91■□□□□ 0.62
SHKBP1-214ENST00000597396 RNF31Q96EP0 1072 aa18.91■□□□□ 0.62
SHKBP1-214ENST00000597396 ULBP3Q9BZM4 244 aa18.91■□□□□ 0.62
SHKBP1-214ENST00000597396 CHRNA10Q9GZZ6 450 aa18.91■□□□□ 0.62
SHKBP1-214ENST00000597396 PCBD2Q9H0N5 130 aa18.91■□□□□ 0.62
SHKBP1-214ENST00000597396 VPS11Q9H270 941 aa18.91■□□□□ 0.62
SHKBP1-214ENST00000597396 TARM1B6A8C7 271 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 STK17BO94768 372 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 KIAA0754O94854 1291 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 MSL3P1P0C860 447 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 LIPCP11150 499 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 TFEBP19484 476 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 EIF2S3P41091 472 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 ABATP80404 500 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 CDKL1Q00532 357 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 IRF9Q00978 393 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 PRDX1Q06830 199 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 DLG1Q12959 904 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 COL9A2Q14055 689 aaPredicted RBP18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 FAM83EQ2M2I3 478 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 FCRL6Q6DN72 434 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 CAPN13Q6MZZ7 669 aaPredicted RBP18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 EMBQ6PCB8 327 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 ADGRD1Q6QNK2 874 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 GPSM1Q86YR5 675 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 TMEM126BQ8IUX1 230 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 KCTD4Q8WVF5 259 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 HNRNPLLQ8WVV9 542 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 KIAA1191Q96A73 305 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 PTERQ96BW5 349 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 NXNL1Q96CM4 212 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 FCRL4Q96PJ5 515 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 DPH7Q9BTV6 452 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 DHRS4Q9BTZ2 278 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 PARD6BQ9BYG5 372 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 SLC6A20Q9NP91 592 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 IRAK4Q9NWZ3 460 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 PSMC3IPQ9P2W1 217 aaPredicted RBP18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 FETUBQ9UGM5 382 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 SERTAD3Q9UJW9 196 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 RNF112Q9ULX5 631 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 PLCL2Q9UPR0 1127 aa18.9■□□□□ 0.62
SHKBP1-214ENST00000597396 IQANK1A0A1B0GTG1 560 aa18.89■□□□□ 0.61
SHKBP1-214ENST00000597396 NCF1BA6NI72 391 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-214ENST00000597396 NCF1CA8MVU1 366 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-214ENST00000597396 S100BP04271 92 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-214ENST00000597396 NCF1P14598 390 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-214ENST00000597396 GCAP28676 217 aa18.89■□□□□ 0.61
SHKBP1-214ENST00000597396 ITGA1P56199 1179 aa18.89■□□□□ 0.61
SHKBP1-214ENST00000597396 YBX1P67809 324 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-214ENST00000597396 TGFBIQ15582 683 aa18.89■□□□□ 0.61
SHKBP1-214ENST00000597396 OR4D1Q15615 310 aa18.89■□□□□ 0.61
SHKBP1-214ENST00000597396 ZC3H12BQ5HYM0 836 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-214ENST00000597396 PWWP2BQ6NUJ5 590 aa18.89■□□□□ 0.61
SHKBP1-214ENST00000597396 ADCK2Q7Z695 626 aa18.89■□□□□ 0.61
SHKBP1-214ENST00000597396 GPR135Q8IZ08 494 aa18.89■□□□□ 0.61
SHKBP1-214ENST00000597396 DNAJC22Q8N4W6 341 aa18.89■□□□□ 0.61
SHKBP1-214ENST00000597396 OR1L3Q8NH93 324 aa18.89■□□□□ 0.61
SHKBP1-214ENST00000597396 AENQ8WTP8 325 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-214ENST00000597396 EXT2Q93063 718 aa18.89■□□□□ 0.61
SHKBP1-214ENST00000597396 ALG9Q9H6U8 611 aa18.89■□□□□ 0.61
SHKBP1-214ENST00000597396 IGSF5Q9NSI5 407 aa18.89■□□□□ 0.61
SHKBP1-214ENST00000597396 ANKMY1Q9P2S6 941 aa18.89■□□□□ 0.61
SHKBP1-214ENST00000597396 TMEM184BQ9Y519 407 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-214ENST00000597396 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 KLK10O43240 276 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 RAD1O60671 282 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 SCRG1O75711 98 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 TIAF1O95411 115 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 ZNF28P17035 718 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 HSD17B3P37058 310 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 HNMTP50135 292 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 CSRP3P50461 194 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 ATP1A2P50993 1020 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 KLC3Q6P597 504 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 LCTLQ6UWM7 567 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 C17orf64Q86WR6 236 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 CENPLQ8N0S6 344 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 OR56A3Q8NH54 315 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 STAG3L4Q8TBR4 150 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 ISL2Q96A47 359 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 PYCR2Q96C36 320 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 MTBPQ96DY7 904 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 TSNARE1Q96NA8 513 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 HAUS8Q9BT25 410 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 SGPP1Q9BX95 441 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 DPH1Q9BZG8 443 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 SLC7A5P2Q9GIP4 190 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 CD274Q9NZQ7 290 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 SNX7Q9UNH6 387 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms