RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 DPH7Q9BTV6 452 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 FUT8Q9BYC5 575 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 ATG10Q9H0Y0 220 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 CHST8Q9H2A9 424 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 CDC42EP4Q9H3Q1 356 aaKnown RBP10.7□□□□□ -0.7
VRK3-210ENST00000596121 GPN2Q9H9Y4 310 aaPredicted RBP10.7□□□□□ -0.7
VRK3-210ENST00000596121 ABCF3Q9NUQ8 709 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 CUEDC1Q9NWM3 386 aaPredicted RBP10.7□□□□□ -0.7
VRK3-210ENST00000596121 SERTAD3Q9UJW9 196 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 PADI1Q9ULC6 663 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 NFU1Q9UMS0 254 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 PLCL2Q9UPR0 1127 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 FER1L5A0AVI2 2057 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 PCM1Q15154 2024 aa10.7□□□□□ -0.7
VRK3-210ENST00000596121 A0A0J9YVX5 310 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 TARM1B6A8C7 271 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 E7EQ34 232 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 MEN1O00255 615 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 CPNE3O75131 537 aaKnown RBP10.69□□□□□ -0.7
VRK3-210ENST00000596121 FKBP9O95302 570 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 FURINP09958 794 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 FAM153BP0C7A2 387 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 CYP2A7P20853 494 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 STX2P32856 288 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 RPA3P35244 121 aaPredicted RBP10.69□□□□□ -0.7
VRK3-210ENST00000596121 HSD17B2P37059 387 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 KCNC1P48547 511 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 CSRP3P50461 194 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 TBPL1P62380 186 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 NFKB2Q00653 900 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 POU4F1Q01851 419 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 DLG1Q12959 904 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 SP140Q13342 867 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 NAE1Q13564 534 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 USP10Q14694 798 aaKnown RBP10.69□□□□□ -0.7
VRK3-210ENST00000596121 C18orf21Q32NC0 220 aaPredicted RBP10.69□□□□□ -0.7
VRK3-210ENST00000596121 PTCHD3Q3KNS1 767 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 LINC00303Q3SY05 128 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 FAM153CQ494X1 144 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 SOWAHCQ53LP3 525 aaPredicted RBP10.69□□□□□ -0.7
VRK3-210ENST00000596121 GRTP1Q5TC63 336 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 ZNF425Q6IV72 752 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 LRRC8EQ6NSJ5 796 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 AGTRAPQ6RW13 159 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 CMC1Q7Z7K0 106 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 PAQR7Q86WK9 346 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 DSELQ8IZU8 1212 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 ZNF655Q8N720 491 aaPredicted RBP10.69□□□□□ -0.7
VRK3-210ENST00000596121 CDKL2Q92772 493 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 MRRFQ96E11 262 aaKnown RBP10.69□□□□□ -0.7
VRK3-210ENST00000596121 SLC45A3Q96JT2 553 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 LRFN5Q96NI6 719 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 OR4K3Q96R72 315 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 PLCD4Q9BRC7 762 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 SGPP1Q9BX95 441 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 FAM129AQ9BZQ8 928 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 ACTR5Q9H9F9 607 aaPredicted RBP10.69□□□□□ -0.7
VRK3-210ENST00000596121 POPDC3Q9HBV1 291 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 GPAMQ9HCL2 828 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 ENAMQ9NRM1 1142 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 UTP6Q9NYH9 597 aaKnown RBP10.69□□□□□ -0.7
VRK3-210ENST00000596121 DHCR7Q9UBM7 475 aaKnown RBP10.69□□□□□ -0.7
VRK3-210ENST00000596121 HEATR5BQ9P2D3 2071 aa10.69□□□□□ -0.7
VRK3-210ENST00000596121 PIEZO2Q9H5I5 2752 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 H7BY64 318 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 CNOT3O75175 753 aaKnown RBP10.68□□□□□ -0.7
VRK3-210ENST00000596121 ACSL3O95573 720 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 GUCA1CO95843 209 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 CCNYL3P0C7X3 344 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 MYBL2P10244 700 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 NPPBP16860 134 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 TCN2P20062 427 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 CMPK1P30085 196 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 SPRP35270 261 aaPredicted RBP10.68□□□□□ -0.7
VRK3-210ENST00000596121 FOXL2P58012 376 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 VSX2P58304 361 aaPredicted RBP10.68□□□□□ -0.7
VRK3-210ENST00000596121 RPS18P62269 152 aaKnown RBP10.68□□□□□ -0.7
VRK3-210ENST00000596121 DNASE1L3Q13609 305 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 BMPR2Q13873 1038 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 OR4D1Q15615 310 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 TSNQ15631 228 aaKnown RBP10.68□□□□□ -0.7
VRK3-210ENST00000596121 C1orf189Q5VU69 101 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 CYB5D1Q6P9G0 228 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 FAM198BQ6UWH4 519 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 RNF44Q7L0R7 432 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 PLD3Q8IV08 490 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 GSPT2Q8IYD1 628 aaKnown RBP10.68□□□□□ -0.7
VRK3-210ENST00000596121 NKAPQ8N5F7 415 aaKnown RBP10.68□□□□□ -0.7
VRK3-210ENST00000596121 OR56A3Q8NH54 315 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 UHMK1Q8TAS1 419 aaKnown RBP10.68□□□□□ -0.7
VRK3-210ENST00000596121 MR1Q95460 341 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 PTERQ96BW5 349 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 PYCR2Q96C36 320 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 FBXL8Q96CD0 374 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 CLIP3Q96DZ5 547 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 UBXN10Q96LJ8 280 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 PRAP1Q96NZ9 151 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 GBP5Q96PP8 586 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 FMO2Q99518 471 aa10.68□□□□□ -0.7
VRK3-210ENST00000596121 ACSS3Q9H6R3 686 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms