RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CCDC88CQ9P219 2028 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 LOC105369274A0A096LPK9 316 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 LOC102723532A0A0G2JNH3 316 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 FITM1A5D6W6 292 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 SRPX2O60687 465 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 KLF7O75840 302 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 SYF2O95926 243 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 ITGAXP20702 1163 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 FDXRP22570 491 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 IMPA1P29218 277 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 CMPK1P30085 196 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 RPA3P35244 121 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 RGS4P49798 205 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 DCDP81605 110 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 PRDX1Q06830 199 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 CALCOCO2Q13137 446 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 TRADDQ15628 312 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 FRMPD2BQ6IN97 320 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 LRRC8EQ6NSJ5 796 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 RNF44Q7L0R7 432 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 OR4N4Q8N0Y3 316 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 GPATCH11Q8N954 259 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 THAP4Q8WY91 577 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 SELENOSQ9BQE4 189 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 PLCD4Q9BRC7 762 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 NDC1Q9BTX1 674 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 MRPS30Q9NP92 439 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 SLC22A11Q9NSA0 550 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 IRAK4Q9NWZ3 460 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 ZFATQ9P243 1243 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 TAC3Q9UHF0 121 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 SNX7Q9UNH6 387 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 PDE10AQ9Y233 779 aa17.71■□□□□ 0.43
SHKBP1-202ENST00000593764 BAHCC1Q9P281 2608 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 ANKRD12Q6UB98 2062 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 ZNF839A8K0R7 811 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 CNOT3O75175 753 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 ALAS2P22557 587 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 PMS2P54278 862 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 VSX2P58304 361 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 TSTA3Q13630 321 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 NKAIN1Q4KMZ8 207 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 TCTE1Q5JU00 501 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 WASHC2DQ5SRD0 308 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 ICE2Q659A1 982 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 ZNF425Q6IV72 752 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 TTLL10Q6ZVT0 673 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 ZNF605Q86T29 641 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 ZC3HC1Q86WB0 502 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 APLFQ8IW19 511 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 MCOLN3Q8TDD5 553 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 LINGO1Q96FE5 620 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 ABHD17AQ96GS6 310 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 C16orf45Q96MC5 204 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 MCMBPQ9BTE3 642 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 DHRS4Q9BTZ2 278 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 SYNPO2LQ9H987 977 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 PARVBQ9HBI1 364 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 SMYD2Q9NRG4 433 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 TXLNGQ9NUQ3 528 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 CDC23Q9UJX2 597 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 MAN2B2Q9Y2E5 1009 aa17.7■□□□□ 0.42
SHKBP1-202ENST00000593764 A0A0J9YVX5 310 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 C9J4A7 227 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 EIF3HO15372 352 aaKnown RBP eCLIP17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 SLC16A5O15375 505 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 PIAS1O75925 651 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 ONECUT2O95948 504 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 C8GP07360 202 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 ARSFP54793 590 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 IL2P60568 153 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 PDAP1Q13442 181 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 GRM7Q14831 915 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 PHKG1Q16816 387 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 MLIPQ5VWP3 458 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 FAM45BPQ6NSW5 357 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 MRPL14Q6P1L8 145 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 TMEM207Q6UWW9 146 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 MBOAT1Q6ZNC8 495 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 STRA8Q7Z7C7 330 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 SLC26A11Q86WA9 606 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 PAQR7Q86WK9 346 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 TMEM151BQ8IW70 566 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 MYO1HQ8N1T3 1032 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 FAM45AQ8TCE6 357 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 PYROXD1Q8WU10 500 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 CCDC138Q96M89 665 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 TRIM55Q9BYV6 548 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 SAYSD1Q9NPB0 183 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 CUTCQ9NTM9 273 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 STOX2Q9P2F5 926 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 ANKMY1Q9P2S6 941 aa17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 UTP11Q9Y3A2 253 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 GCN1Q92616 2671 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-202ENST00000593764 A0A1B0GX78 115 aa17.68■□□□□ 0.42
SHKBP1-202ENST00000593764 DSCR3O14972 297 aa17.68■□□□□ 0.42
SHKBP1-202ENST00000593764 MED26O95402 600 aa17.68■□□□□ 0.42
SHKBP1-202ENST00000593764 PLA2G2AP14555 144 aa17.68■□□□□ 0.42
SHKBP1-202ENST00000593764 SSTR1P30872 391 aa17.68■□□□□ 0.42
SHKBP1-202ENST00000593764 PLTPP55058 493 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms