RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 ABHD17BQ5VST6 288 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 DOLPP1Q86YN1 238 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 CCDC50Q8IVM0 306 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 SIAH3Q8IW03 269 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 BEST3Q8N1M1 668 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 CFAP61Q8NHU2 1237 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 SUN3Q8TAQ9 357 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 LKAAEAR1Q8TD35 194 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 DENND1AQ8TEH3 1009 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 THAP3Q8WTV1 239 aaPredicted RBP12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 DMRTA2Q96SC8 542 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 NPAS2Q99743 824 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 TRIM51Q9BSJ1 452 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 GPAMQ9HCL2 828 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 SCN2AQ99250 2005 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 NKX2-6A6NCS4 301 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 A8MUI8 341 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 OR1I1O60431 355 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 GYPCP04921 128 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 TPH1P17752 444 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 KLK2P20151 261 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 TRIM14Q14142 442 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 FAM214AQ32MH5 1076 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 CCSMST1Q4G0I0 132 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 ZC3H12BQ5HYM0 836 aaKnown RBP12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 RNFT1Q5M7Z0 435 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 RIPOR1Q6ZS17 1223 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 TGIF2LYQ8IUE0 185 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 MARVELD2Q8N4S9 558 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 AMER3Q8N944 861 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 MDS2Q8NDY4 140 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 CA5BP1Q8WTZ4 195 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 MRFAP1L1Q96HT8 127 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 IMMP1LQ96LU5 166 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 FRMD6Q96NE9 622 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 VAT1Q99536 393 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 YIPF2Q9BWQ6 316 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 UCK2Q9BZX2 261 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 ZNF700Q9H0M5 742 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 LIME1Q9H400 295 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 GOLPH3Q9H4A6 298 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 RIC8BQ9NVN3 520 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 PIH1D1Q9NWS0 290 aaKnown RBP12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 IL1RAPL1Q9NZN1 696 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 TRPC4Q9UBN4 977 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 HRH3Q9Y5N1 445 aa12.12□□□□□ -0.47
PRKCSH-210ENST00000589990 LOC102723996A0A087X1L8 192 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 FANCGO15287 622 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 SEC24DO94855 1032 aaPredicted RBP12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 AP2A2O94973 939 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 TMEM253P0C7T8 217 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 DRD2P14416 443 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 CXCR2P25025 360 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 CCR7P32248 378 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 MARCKSL1P49006 195 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 ALDH6A1Q02252 535 aaKnown RBP12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 TUBA3CQ13748 450 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 TFDP2Q14188 446 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 LONRF1Q17RB8 773 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 SYTL3Q4VX76 610 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 LRRC38Q5VT99 294 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 SPINK14Q6IE38 97 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 TUBA3EQ6PEY2 450 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 BZW1Q7L1Q6 419 aaKnown RBP12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 TMEM200AQ86VY9 491 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 DNAAF3Q8N9W5 541 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 OR8K1Q8NGG5 319 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 OR2L8Q8NGY9 312 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 P3H4Q92791 437 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 CDKN2AIPNLQ96HQ2 116 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 MIPEPQ99797 713 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 FAM118BQ9BPY3 351 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 LUC7LQ9NQ29 371 aaKnown RBP12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 CCM2LQ9NUG4 571 aaPredicted RBP12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 NLE1Q9NVX2 485 aaPredicted RBP12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 TRHDEQ9UKU6 1024 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 PPT2Q9UMR5 302 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 ASB1Q9Y576 335 aa12.11□□□□□ -0.47
PRKCSH-210ENST00000589990 JMJD1CQ15652 2540 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 hCG_1818297A0A087WSY0 165 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 A0A0U1RQJ8 604 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 ASPDHA6ND91 283 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 OR2W5A6NFC9 320 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 IQCF5A8MTL0 148 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 H7C0S8 307 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 ASNA1O43681 348 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 ANXA9O76027 345 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 S1PR4O95977 384 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 HEXBP07686 556 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 GSTM1P09488 218 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 ABOP16442 354 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 COMTP21964 271 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 CD96P40200 585 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 MAT1AQ00266 395 aaKnown RBP12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 GSTM4Q03013 218 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 TFF3Q07654 80 aa12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 FOXD4Q12950 439 aaPredicted RBP12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 FASTKQ14296 549 aaKnown RBP12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 ASTE1Q2TB18 679 aaPredicted RBP12.1□□□□□ -0.47
PRKCSH-210ENST00000589990 HKDC1Q2TB90 917 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms