RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 OR2A25A4D2G3 310 aa13.34□□□□□ -0.27
VMP1-209ENST00000588915 CD3EAPO15446 510 aaKnown RBP13.34□□□□□ -0.27
VMP1-209ENST00000588915 BMP10O95393 424 aa13.34□□□□□ -0.27
VMP1-209ENST00000588915 CXCR2P25025 360 aa13.34□□□□□ -0.27
VMP1-209ENST00000588915 SOX11P35716 441 aa13.34□□□□□ -0.27
VMP1-209ENST00000588915 TNFSF10P50591 281 aa13.34□□□□□ -0.27
VMP1-209ENST00000588915 TDGF1P3P51864 188 aa13.34□□□□□ -0.27
VMP1-209ENST00000588915 ARG2P78540 354 aa13.34□□□□□ -0.27
VMP1-209ENST00000588915 SEMA3AQ14563 771 aa13.34□□□□□ -0.27
VMP1-209ENST00000588915 OASLQ15646 514 aaKnown RBP13.34□□□□□ -0.27
VMP1-209ENST00000588915 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.34□□□□□ -0.27
VMP1-209ENST00000588915 PCID2Q5JVF3 399 aa13.34□□□□□ -0.27
VMP1-209ENST00000588915 PTRHD1Q6GMV3 140 aaKnown RBP13.34□□□□□ -0.27
VMP1-209ENST00000588915 FRMPD2BQ6IN97 320 aa13.34□□□□□ -0.27
VMP1-209ENST00000588915 OTOAQ7RTW8 1153 aa13.34□□□□□ -0.27
VMP1-209ENST00000588915 SRRM1Q8IYB3 904 aaKnown RBP13.34□□□□□ -0.27
VMP1-209ENST00000588915 TXLNBQ8N3L3 684 aa13.34□□□□□ -0.27
VMP1-209ENST00000588915 CATSPER1Q8NEC5 780 aa13.34□□□□□ -0.27
VMP1-209ENST00000588915 LKAAEAR1Q8TD35 194 aa13.34□□□□□ -0.27
VMP1-209ENST00000588915 PSMF1Q92530 271 aa13.34□□□□□ -0.27
VMP1-209ENST00000588915 ZFYVE21Q9BQ24 234 aa13.34□□□□□ -0.27
VMP1-209ENST00000588915 P2RY12Q9H244 342 aa13.34□□□□□ -0.27
VMP1-209ENST00000588915 ZNF160Q9HCG1 818 aa13.34□□□□□ -0.27
VMP1-209ENST00000588915 TTC7AQ9ULT0 858 aaPredicted RBP13.34□□□□□ -0.27
VMP1-209ENST00000588915 KLF2Q9Y5W3 355 aaPredicted RBP13.34□□□□□ -0.27
VMP1-209ENST00000588915 MAU2Q9Y6X3 613 aa13.34□□□□□ -0.27
VMP1-209ENST00000588915 CROCCQ5TZA2 2017 aa13.34□□□□□ -0.27
VMP1-209ENST00000588915 A0A0J9YVX5 310 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 A0A1W2PPV9 198 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 AP3B1O00203 1094 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 SERPINA7P05543 415 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 PRR35P0CG20 571 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 MYBL2P10244 700 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 ERVK-10P10266 1014 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 ICAM2P13598 275 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 CMPK1P30085 196 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 GRIA1P42261 906 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 EMP2P54851 167 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 RELAQ04206 551 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 PRTGQ2VWP7 1150 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 GARNL3Q5VVW2 1013 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 FBXO42Q6P3S6 717 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 FJX1Q86VR8 437 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 KRT222Q8N1A0 295 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 TAB3Q8N5C8 712 aaPredicted RBP13.33□□□□□ -0.28
VMP1-209ENST00000588915 METTL27Q8N6F8 245 aaPredicted RBP13.33□□□□□ -0.28
VMP1-209ENST00000588915 PPHLN1Q8NEY8 458 aaKnown RBP13.33□□□□□ -0.28
VMP1-209ENST00000588915 DNAJB8Q8NHS0 232 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 NR4A3Q92570 626 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 HES6Q96HZ4 224 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 TGIF2Q9GZN2 237 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 RNF32Q9H0A6 362 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 C14orf105Q9NVL8 296 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 COPG2Q9UBF2 871 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 CIDEBQ9UHD4 219 aa13.33□□□□□ -0.28
VMP1-209ENST00000588915 MRPS2Q9Y399 296 aaKnown RBP13.33□□□□□ -0.28
VMP1-209ENST00000588915 LOC105369274A0A096LPK9 316 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 LOC102723532A0A0G2JNH3 316 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 TCRBV7S2A1N4TA0A589 114 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 IDSB3KWA1 339 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 PRSS44E7EML9 344 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 TXNDC9O14530 226 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 LIASO43766 372 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 VPS26AO75436 327 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 NDUFS3O75489 264 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 MED26O95402 600 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 MATN4O95460 622 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 CRYABP02511 175 aaKnown RBP13.32□□□□□ -0.28
VMP1-209ENST00000588915 ERGP11308 486 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 COX6A1P12074 109 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 FBLP22087 321 aaKnown RBP13.32□□□□□ -0.28
VMP1-209ENST00000588915 ATP5DP30049 168 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 KIF5AQ12840 1032 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 DSG2Q14126 1118 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 ARHGAP19Q14CB8 494 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 VWA2Q5GFL6 755 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 MTFR2Q6P444 385 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 RAD9BQ6WBX8 426 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 KIAA1328Q86T90 577 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 LDB1Q86U70 411 aaPredicted RBP13.32□□□□□ -0.28
VMP1-209ENST00000588915 LAPTM4BQ86VI4 370 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 OR4N4Q8N0Y3 316 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 SKA2Q8WVK7 121 aaPredicted RBP13.32□□□□□ -0.28
VMP1-209ENST00000588915 TAAR6Q96RI8 345 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 MIPEPQ99797 713 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 MKKSQ9NPJ1 570 aaPredicted RBP13.32□□□□□ -0.28
VMP1-209ENST00000588915 RAB6BQ9NRW1 208 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 TREX1Q9NSU2 369 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 RIC8BQ9NVN3 520 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 UTP6Q9NYH9 597 aaKnown RBP13.32□□□□□ -0.28
VMP1-209ENST00000588915 PAK5Q9P286 719 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 PTGFRNQ9P2B2 879 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 MARCH4Q9P2E8 410 aaPredicted RBP13.32□□□□□ -0.28
VMP1-209ENST00000588915 PACSIN2Q9UNF0 486 aaPredicted RBP13.32□□□□□ -0.28
VMP1-209ENST00000588915 ZNF148Q9UQR1 794 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 NFS1Q9Y697 457 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 CSMD1Q96PZ7 3565 aa13.32□□□□□ -0.28
VMP1-209ENST00000588915 LOC102723996A0A087X1L8 192 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 IGHV1-45A0A0A0MS14 117 aa13.31□□□□□ -0.28
VMP1-209ENST00000588915 ARHGAP10A1A4S6 786 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms