RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 IL1R2P27930 398 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 MAP3K8P41279 467 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 ATAD1Q8NBU5 361 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 MTERF1Q99551 399 aaKnown RBP12.75□□□□□ -0.37
RNF43-208ENST00000584437 EXO5Q9H790 373 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 DDNO94850 711 aaPredicted RBP12.74□□□□□ -0.37
RNF43-208ENST00000584437 STBD1O95210 358 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 SIX3O95343 332 aaPredicted RBP12.74□□□□□ -0.37
RNF43-208ENST00000584437 F8A1P23610 371 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 FSHRP23945 695 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 PCLAFQ15004 111 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 POMZP3Q6PJE2 187 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 RBM18Q96H35 190 aaKnown RBP12.74□□□□□ -0.37
RNF43-208ENST00000584437 OR2B2Q9GZK3 357 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 SLC32A1Q9H598 525 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 ZCCHC3Q9NUD5 404 aaKnown RBP12.74□□□□□ -0.37
RNF43-208ENST00000584437 GTF2IRD1Q9UHL9 959 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 HCN2Q9UL51 889 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 TRBC2A0A5B9 178 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 SH3PXD2BA1X283 911 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 TLX3O43711 291 aaPredicted RBP12.74□□□□□ -0.37
RNF43-208ENST00000584437 RCBTB2O95199 551 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 RB1P06400 928 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 PGAM2P15259 253 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 ZNF182P17025 639 aaPredicted RBP12.74□□□□□ -0.37
RNF43-208ENST00000584437 SLC9A3P48764 834 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 TAS2R43P59537 309 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 SLC2A7Q6PXP3 512 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 FAM43BQ6ZT52 329 aaPredicted RBP12.74□□□□□ -0.37
RNF43-208ENST00000584437 CPNE8Q86YQ8 564 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 OR6K6Q8NGW6 343 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 ADAMTS10Q9H324 1103 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 CHMP1AQ9HD42 196 aaPredicted RBP12.74□□□□□ -0.37
RNF43-208ENST00000584437 CD93Q9NPY3 652 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 FAM120CQ9NX05 1096 aaKnown RBP12.74□□□□□ -0.37
RNF43-208ENST00000584437 FBXO9Q9UK97 447 aaPredicted RBP12.74□□□□□ -0.37
RNF43-208ENST00000584437 PCDHA2Q9Y5H9 948 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 SLIT3O75094 1523 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 SYN3O14994 580 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 TYROBPO43914 113 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 CYB5AP00167 134 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 VIPP01282 170 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 GRK5P34947 590 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 DNAJB13P59910 316 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 RPL6Q02878 288 aaKnown RBP12.74□□□□□ -0.37
RNF43-208ENST00000584437 GALNT13Q8IUC8 556 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 TMEM203Q969S6 136 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 ITPKCQ96DU7 683 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 RAB11FIP5Q9BXF6 653 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 MTFR1LQ9H019 292 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 BTBD1Q9H0C5 482 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 SLC17A6Q9P2U8 582 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 GPN3Q9UHW5 284 aaPredicted RBP12.74□□□□□ -0.37
RNF43-208ENST00000584437 AURKAO14965 403 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 HPRP00739 348 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 MMP3P08254 477 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 MPIP34949 423 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 NDUFV1P49821 464 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 NUDT6P53370 316 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 VLDLRP98155 873 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 HMGCS1Q01581 520 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 HSD17B12Q53GQ0 312 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 TCEAL6Q6IPX3 200 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 CES5AQ6NT32 575 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 RGL4Q8IZJ4 473 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 TRUB1Q8WWH5 349 aaKnown RBP12.74□□□□□ -0.37
RNF43-208ENST00000584437 UPF1Q92900 1129 aaKnown RBP eCLIP12.74□□□□□ -0.375e-8■■■□□ 17.1
RNF43-208ENST00000584437 ZNF514Q96K75 400 aaPredicted RBP12.74□□□□□ -0.37
RNF43-208ENST00000584437 PSKH2Q96QS6 385 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 OSBPL2Q9H1P3 480 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 ZNF696Q9H7X3 374 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 ARL5AQ9Y689 179 aa12.74□□□□□ -0.37
RNF43-208ENST00000584437 SLC19A2O60779 497 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 CHRNA4P43681 627 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 MC1RQ01726 317 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 ATP6AP1Q15904 470 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 ABCA11PQ4W5N1 156 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 FRG2Q64ET8 278 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 TMEM220Q6QAJ8 160 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 ARL9Q6T311 187 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 USP50Q70EL3 339 aaPredicted RBP12.73□□□□□ -0.37
RNF43-208ENST00000584437 ZNF627Q7L945 461 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 NUP54Q7Z3B4 507 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 NUDT13Q86X67 352 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 STOML3Q8TAV4 291 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 NKD1Q969G9 470 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 FRG2BQ96QU4 278 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 ITM2CQ9NQX7 267 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 CYTH4Q9UIA0 394 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 TMEM233B4DJY2 109 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 M0R233 179 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 DGKQP52824 942 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 INHBEP58166 350 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 EMX2Q04743 252 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 RAB39AQ14964 217 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 ZNF630Q2M218 657 aaPredicted RBP12.73□□□□□ -0.37
RNF43-208ENST00000584437 TBRG1Q3YBR2 411 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 PRAMEF19Q5SWL8 479 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 PM20D2Q8IYS1 436 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 AKAP1Q92667 903 aaKnown RBP eCLIP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms