RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 NAT9Q9BTE0 207 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 CLMPQ9H6B4 373 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 ENAMQ9NRM1 1142 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 CUTCQ9NTM9 273 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 PCSK5Q92824 1860 aa20.54■□□□□ 0.88
PPP4R1-228ENST00000584074 OR2A25A4D2G3 310 aa20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 FITM1A5D6W6 292 aa20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 A6NL46 340 aa20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 DSCR3O14972 297 aa20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 TTI1O43156 1089 aa20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 SRPX2O60687 465 aaPredicted RBP20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 CD63P08962 238 aa20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 HSD17B2P37059 387 aa20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 CARSP49589 748 aaKnown RBP20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 PGDP52209 483 aa20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 SSPNQ14714 243 aa20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 FBXO42Q6P3S6 717 aa20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 RNF44Q7L0R7 432 aa20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 PDIK1LQ8N165 341 aa20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 DTWD1Q8N5C7 304 aa20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 METTL27Q8N6F8 245 aaPredicted RBP20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 TTC29Q8NA56 475 aaPredicted RBP20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 CFAP36Q96G28 342 aa20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 RUNDC3BQ96NL0 473 aa20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 MLXIPLQ9NP71 852 aa20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 MRPS30Q9NP92 439 aaKnown RBP20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 SLC17A6Q9P2U8 582 aa20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 TAC3Q9UHF0 121 aa20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 TRMT6Q9UJA5 497 aaKnown RBP20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 PCDHGA9Q9Y5G4 932 aaKnown RBP20.53■□□□□ 0.88
PPP4R1-228ENST00000584074 IGKV1-8A0A0C4DH67 115 aa20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 E7ENX8 843 aa20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 ZBTB14O43829 449 aa20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 MED26O95402 600 aa20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 AHSGP02765 367 aa20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 EIF2S1P05198 315 aaKnown RBP20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 UMODP07911 640 aa20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 ELK3P41970 407 aa20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 TAP2Q03519 686 aa20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 RBM20Q5T481 1227 aaKnown RBP20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 YOD1Q5VVQ6 348 aaPredicted RBP20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 HIBCHQ6NVY1 386 aaPredicted RBP20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 UBE2R2Q712K3 238 aaPredicted RBP20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 MED25Q71SY5 747 aa20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 CNTN4Q8IWV2 1026 aa20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 TMEM102Q8N9M5 508 aaPredicted RBP20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 EEF1AKMT1Q8WVE0 214 aa20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 PTERQ96BW5 349 aa20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 CERS2Q96G23 380 aa20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 WDR83Q9BRX9 315 aaKnown RBP20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 TRIM31Q9BZY9 425 aa20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 PPANQ9NQ55 473 aaKnown RBP20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 ABCF3Q9NUQ8 709 aa20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 STOX2Q9P2F5 926 aaPredicted RBP20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 ZC3H7BQ9UGR2 993 aaKnown RBP20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 CHMP2BQ9UQN3 213 aa20.52■□□□□ 0.88
PPP4R1-228ENST00000584074 HYKKA2RU49 373 aa20.51■□□□□ 0.87
PPP4R1-228ENST00000584074 ZNF839A8K0R7 811 aa20.51■□□□□ 0.87
PPP4R1-228ENST00000584074 SMAPO00193 183 aa20.51■□□□□ 0.87
PPP4R1-228ENST00000584074 CEACAM4O75871 244 aa20.51■□□□□ 0.87
PPP4R1-228ENST00000584074 ONECUT2O95948 504 aa20.51■□□□□ 0.87
PPP4R1-228ENST00000584074 SKIV2L2P42285 1042 aaKnown RBP20.51■□□□□ 0.87
PPP4R1-228ENST00000584074 PAFAH1B1P43034 410 aa20.51■□□□□ 0.87
PPP4R1-228ENST00000584074 OR1D4P47884 311 aa20.51■□□□□ 0.87
PPP4R1-228ENST00000584074 ITGA8P53708 1063 aa20.51■□□□□ 0.87
PPP4R1-228ENST00000584074 RRADP55042 308 aa20.51■□□□□ 0.87
PPP4R1-228ENST00000584074 CDKN2DP55273 166 aa20.51■□□□□ 0.87
PPP4R1-228ENST00000584074 PRDX1Q06830 199 aaKnown RBP20.51■□□□□ 0.87
PPP4R1-228ENST00000584074 IGFBP7Q16270 282 aa20.51■□□□□ 0.87
PPP4R1-228ENST00000584074 FAM214AQ32MH5 1076 aa20.51■□□□□ 0.87
PPP4R1-228ENST00000584074 ICE2Q659A1 982 aa20.51■□□□□ 0.87
PPP4R1-228ENST00000584074 COX15Q7KZN9 410 aa20.51■□□□□ 0.87
PPP4R1-228ENST00000584074 OVCH1Q7RTY7 1134 aa20.51■□□□□ 0.87
PPP4R1-228ENST00000584074 FDCSPQ8NFU4 85 aa20.51■□□□□ 0.87
PPP4R1-228ENST00000584074 ZFYVE21Q9BQ24 234 aa20.51■□□□□ 0.87
PPP4R1-228ENST00000584074 PLCD4Q9BRC7 762 aa20.51■□□□□ 0.87
PPP4R1-228ENST00000584074 SYNPO2LQ9H987 977 aa20.51■□□□□ 0.87
PPP4R1-228ENST00000584074 TEX264Q9Y6I9 313 aa20.51■□□□□ 0.87
PPP4R1-228ENST00000584074 FER1L5A0AVI2 2057 aa20.5■□□□□ 0.87
PPP4R1-228ENST00000584074 ASH1LQ9NR48 2969 aaKnown RBP20.5■□□□□ 0.87
PPP4R1-228ENST00000584074 CCDC188H7C350 402 aa20.5■□□□□ 0.87
PPP4R1-228ENST00000584074 EIF3FO00303 357 aaPredicted RBP20.5■□□□□ 0.87
PPP4R1-228ENST00000584074 TP73O15350 636 aa20.5■□□□□ 0.87
PPP4R1-228ENST00000584074 SEC31AO94979 1220 aaKnown RBP20.5■□□□□ 0.87
PPP4R1-228ENST00000584074 NAA25Q14CX7 972 aa20.5■□□□□ 0.87
PPP4R1-228ENST00000584074 HIF1AQ16665 826 aa20.5■□□□□ 0.87
PPP4R1-228ENST00000584074 TEDDM1Q5T9Z0 273 aa20.5■□□□□ 0.87
PPP4R1-228ENST00000584074 TRMT10BQ6PF06 316 aaKnown RBP20.5■□□□□ 0.87
PPP4R1-228ENST00000584074 PAQR3Q6TCH7 311 aa20.5■□□□□ 0.87
PPP4R1-228ENST00000584074 KIAA0408Q6ZU52 694 aa20.5■□□□□ 0.87
PPP4R1-228ENST00000584074 PPP1R32Q7Z5V6 425 aa20.5■□□□□ 0.87
PPP4R1-228ENST00000584074 PAQR7Q86WK9 346 aa20.5■□□□□ 0.87
PPP4R1-228ENST00000584074 LRRC56Q8IYG6 542 aaPredicted RBP20.5■□□□□ 0.87
PPP4R1-228ENST00000584074 GABPB2Q8TAK5 448 aaPredicted RBP20.5■□□□□ 0.87
PPP4R1-228ENST00000584074 FKBP10Q96AY3 582 aa20.5■□□□□ 0.87
PPP4R1-228ENST00000584074 SNF8Q96H20 258 aa20.5■□□□□ 0.87
PPP4R1-228ENST00000584074 IP6K3Q96PC2 410 aa20.5■□□□□ 0.87
PPP4R1-228ENST00000584074 KRT12Q99456 494 aa20.5■□□□□ 0.87
PPP4R1-228ENST00000584074 NUDT9Q9BW91 350 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms