RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	DDX3X	O00571	662 aa	Known RBP eCLIP	5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	TFEC	O14948	347 aa	Predicted RBP	5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	DSCR3	O14972	297 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	SLC35G4	P0C7Q5	338 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	FAM157C	P0CG43	387 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	ITGAM	P11215	1152 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	DES	P17661	470 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	ATF4	P18848	351 aa	Predicted RBP	5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	TACR1	P25103	407 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	CDH5	P33151	784 aa	Predicted RBP	5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	PTGER1	P34995	402 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	MMP13	P45452	471 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	OC90	Q02509	493 aa	Predicted RBP	5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	LRRC63	Q05C16	580 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	AP1B1	Q10567	949 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	TUBA3C	Q13748	450 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	NFE2L1	Q14494	772 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	TCEAL1	Q15170	157 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	RABEP1	Q15276	862 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	OR1C1	Q15619	314 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	C10orf62	Q5T681	223 aa	Predicted RBP	5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	MEI1	Q5TIA1	1274 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	MARC1	Q5VT66	337 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	YOD1	Q5VVQ6	348 aa	Predicted RBP	5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	METRNL	Q641Q3	311 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	HIST2H2BD	Q6DRA6	164 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	SPINK14	Q6IE38	97 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	SLC25A25	Q6KCM7	469 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	ARHGAP11A	Q6P4F7	1023 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	TUBA3E	Q6PEY2	450 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	KDELC1	Q6UW63	502 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	FGD2	Q7Z6J4	655 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	PGBD5	Q8N414	524 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	PPM1N	Q8N819	430 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	MDS2	Q8NDY4	140 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	STT3B	Q8TCJ2	826 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	EPS8L3	Q8TE67	593 aa	Known RBP	5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	CENPI	Q92674	756 aa	Predicted RBP	5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	TMEM125	Q96AQ2	219 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	WDR89	Q96FK6	387 aa	Predicted RBP	5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	SIGLEC12	Q96PQ1	595 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	LYSMD1	Q96S90	227 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	TUBGCP2	Q9BSJ2	902 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	CNPY3	Q9BT09	278 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	HES7	Q9BYE0	225 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	CHRNA10	Q9GZZ6	450 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	WWP1	Q9H0M0	922 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	C12orf49	Q9H741	205 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	SSU72	Q9NP77	194 aa	Known RBP	5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	NLRC4	Q9NPP4	1024 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	YAE1D1	Q9NRH1	226 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	HAUS2	Q9NVX0	235 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	ACTR10	Q9NZ32	417 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	DTL	Q9NZJ0	730 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	B4GALT7	Q9UBV7	327 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	CTSF	Q9UBX1	484 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	ZNF282	Q9UDV7	671 aa	Predicted RBP	5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	CDC42EP3	Q9UKI2	254 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	ACSL5	Q9ULC5	683 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	FZD10	Q9ULW2	581 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	PCDHA7	Q9UN72	937 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	CHKB	Q9Y259	395 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	USF3	Q68DE3	2245 aa		5.67	□□□□□ -1.5
KPNB1-209	ENST00000580158	ZAN	Q9Y493	2812 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	IGHV1-45	A0A0A0MS14	117 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	FAM170A	A1A519	330 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	HYKK	A2RU49	373 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	SERINC4	A6NH21	518 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	C2CD4B	A6NLJ0	364 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	CLCA1	A8K7I4	914 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	EIF3CL	B5ME19	914 aa	Known RBP	5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	BTN3A3	O00478	584 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	BTN3A1	O00481	513 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	MT-CYB	P00156	380 aa	Predicted RBP	5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	SP1	P08047	785 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	CELA2A	P08217	269 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	ZGLP1	P0C6A0	271 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	TFEB	P19484	476 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	SYT1	P21579	422 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	GPD1	P21695	349 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	PBLD	P30039	288 aa	Predicted RBP	5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	CD96	P40200	585 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	PRCP	P42785	496 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	OR1D4	P47884	311 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	EMP2	P54851	167 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	DCDC1	P59894	354 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	RPL26	P61254	145 aa	Known RBP	5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	APBA1	Q02410	837 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	EEF1A2	Q05639	463 aa	Known RBP	5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	MEP1A	Q16819	746 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	FAM214A	Q32MH5	1076 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	ATP13A4	Q4VNC1	1196 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	ACER2	Q5QJU3	275 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	KAZN	Q674X7	775 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	GJB7	Q6PEY0	223 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	TMEM220	Q6QAJ8	160 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	SPESP1	Q6UW49	350 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	UNC5D	Q6UXZ4	953 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	COX15	Q7KZN9	410 aa		5.66	□□□□□ -1.5

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