RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 NFATC3Q12968 1075 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 IL10RAQ13651 578 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 GRM7Q14831 915 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 DUPD1Q68J44 220 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 FAM45BPQ6NSW5 357 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 PAQR3Q6TCH7 311 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 SUSD1Q6UWL2 747 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 UBE2R2Q712K3 238 aaPredicted RBP14.23□□□□□ -0.13
SS18-212ENST00000579061 RNF44Q7L0R7 432 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 PIWIL4Q7Z3Z4 852 aaKnown RBP14.23□□□□□ -0.13
SS18-212ENST00000579061 LRRC56Q8IYG6 542 aaPredicted RBP14.23□□□□□ -0.13
SS18-212ENST00000579061 TTC29Q8NA56 475 aaPredicted RBP14.23□□□□□ -0.13
SS18-212ENST00000579061 FBXO36Q8NEA4 188 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 FAM45AQ8TCE6 357 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 MCOLN3Q8TDD5 553 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 SELENOSQ9BQE4 189 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 DPH7Q9BTV6 452 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 MRPS30Q9NP92 439 aaKnown RBP14.23□□□□□ -0.13
SS18-212ENST00000579061 NSMCE4AQ9NXX6 385 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 UTP6Q9NYH9 597 aaKnown RBP14.23□□□□□ -0.13
SS18-212ENST00000579061 ZFATQ9P243 1243 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 DHCR7Q9UBM7 475 aaKnown RBP14.23□□□□□ -0.13
SS18-212ENST00000579061 BAHCC1Q9P281 2608 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 A0A1B0GX78 115 aa14.22□□□□□ -0.13
SS18-212ENST00000579061 DSCR3O14972 297 aa14.22□□□□□ -0.13
SS18-212ENST00000579061 RFPL1O75677 317 aa14.22□□□□□ -0.13
SS18-212ENST00000579061 SYF2O95926 243 aaKnown RBP14.22□□□□□ -0.13
SS18-212ENST00000579061 PIM1P11309 404 aaPredicted RBP14.22□□□□□ -0.13
SS18-212ENST00000579061 FDXRP22570 491 aa14.22□□□□□ -0.13
SS18-212ENST00000579061 CDKN2DP55273 166 aa14.22□□□□□ -0.13
SS18-212ENST00000579061 C2orf54Q08AI8 447 aa14.22□□□□□ -0.13
SS18-212ENST00000579061 FAM214AQ32MH5 1076 aa14.22□□□□□ -0.13
SS18-212ENST00000579061 HECTD2Q5U5R9 776 aa14.22□□□□□ -0.13
SS18-212ENST00000579061 ICE2Q659A1 982 aa14.22□□□□□ -0.13
SS18-212ENST00000579061 SLC26A11Q86WA9 606 aa14.22□□□□□ -0.13
SS18-212ENST00000579061 ANKMY2Q8IV38 441 aa14.22□□□□□ -0.13
SS18-212ENST00000579061 PALM2Q8IXS6 379 aa14.22□□□□□ -0.13
SS18-212ENST00000579061 MYO1HQ8N1T3 1032 aa14.22□□□□□ -0.13
SS18-212ENST00000579061 C9orf43Q8TAL5 461 aaPredicted RBP14.22□□□□□ -0.13
SS18-212ENST00000579061 EEF1AKMT1Q8WVE0 214 aa14.22□□□□□ -0.13
SS18-212ENST00000579061 ZFYVE21Q9BQ24 234 aa14.22□□□□□ -0.13
SS18-212ENST00000579061 PLCD4Q9BRC7 762 aa14.22□□□□□ -0.13
SS18-212ENST00000579061 PHACTR1Q9C0D0 580 aa14.22□□□□□ -0.13
SS18-212ENST00000579061 PARVBQ9HBI1 364 aa14.22□□□□□ -0.13
SS18-212ENST00000579061 SLC6A20Q9NP91 592 aa14.22□□□□□ -0.13
SS18-212ENST00000579061 NDOR1Q9UHB4 597 aa14.22□□□□□ -0.13
SS18-212ENST00000579061 TAC3Q9UHF0 121 aa14.22□□□□□ -0.13
SS18-212ENST00000579061 GPN3Q9UHW5 284 aaPredicted RBP14.22□□□□□ -0.13
SS18-212ENST00000579061 VWA7Q9Y334 891 aa14.22□□□□□ -0.13
SS18-212ENST00000579061 UTP11Q9Y3A2 253 aaKnown RBP14.22□□□□□ -0.13
SS18-212ENST00000579061 HELZ2Q9BYK8 2649 aaKnown RBP14.22□□□□□ -0.13
SS18-212ENST00000579061 MKRN2OSH3BPM6 223 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 KLF7O75840 302 aaPredicted RBP14.21□□□□□ -0.13
SS18-212ENST00000579061 PLA2G2AP14555 144 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 IMPA1P29218 277 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 IL2P60568 153 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 CAV1Q03135 178 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 PDAP1Q13442 181 aaKnown RBP14.21□□□□□ -0.13
SS18-212ENST00000579061 FASTKD3Q14CZ7 662 aaKnown RBP14.21□□□□□ -0.13
SS18-212ENST00000579061 NKAIN1Q4KMZ8 207 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 WASHC2DQ5SRD0 308 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 C1orf189Q5VU69 101 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 MLIPQ5VWP3 458 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 ZNF425Q6IV72 752 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 MRPL14Q6P1L8 145 aaKnown RBP14.21□□□□□ -0.13
SS18-212ENST00000579061 FBXO42Q6P3S6 717 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 RAB43Q86YS6 212 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 ZBED8Q8IZ13 594 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 GPATCH11Q8N954 259 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 PYROXD1Q8WU10 500 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 FKBP10Q96AY3 582 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 ABHD17AQ96GS6 310 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 PDLIM5Q96HC4 596 aaKnown RBP14.21□□□□□ -0.13
SS18-212ENST00000579061 CCDC138Q96M89 665 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 IP6K3Q96PC2 410 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 ACAT2Q9BWD1 397 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 PCBD2Q9H0N5 130 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 RAB17Q9H0T7 212 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 DPH5Q9H2P9 285 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 CUTCQ9NTM9 273 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 GRHL1Q9NZI5 618 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 IFT80Q9P2H3 777 aaPredicted RBP14.21□□□□□ -0.13
SS18-212ENST00000579061 SLC17A6Q9P2U8 582 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 PDE10AQ9Y233 779 aa14.21□□□□□ -0.13
SS18-212ENST00000579061 HEMK1Q9Y5R4 338 aaPredicted RBP14.21□□□□□ -0.13
SS18-212ENST00000579061 IGKV1-8A0A0C4DH67 115 aa14.2□□□□□ -0.14
SS18-212ENST00000579061 A0A0J9YVX5 310 aa14.2□□□□□ -0.14
SS18-212ENST00000579061 TSPAN12O95859 305 aa14.2□□□□□ -0.14
SS18-212ENST00000579061 ALBP02768 609 aa14.2□□□□□ -0.14
SS18-212ENST00000579061 EZRP15311 586 aaKnown RBP14.2□□□□□ -0.14
SS18-212ENST00000579061 ALAS2P22557 587 aa14.2□□□□□ -0.14
SS18-212ENST00000579061 HRH2P25021 359 aa14.2□□□□□ -0.14
SS18-212ENST00000579061 EMP3P54852 163 aa14.2□□□□□ -0.14
SS18-212ENST00000579061 VSX2P58304 361 aaPredicted RBP14.2□□□□□ -0.14
SS18-212ENST00000579061 MRPS25P82663 173 aaKnown RBP14.2□□□□□ -0.14
SS18-212ENST00000579061 NFKB2Q00653 900 aa14.2□□□□□ -0.14
SS18-212ENST00000579061 CKAP4Q07065 602 aaKnown RBP14.2□□□□□ -0.14
SS18-212ENST00000579061 TSTA3Q13630 321 aaPredicted RBP14.2□□□□□ -0.14
SS18-212ENST00000579061 SSPNQ14714 243 aa14.2□□□□□ -0.14
SS18-212ENST00000579061 LACTB2Q53H82 288 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms