RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 DYRK4Q9NR20 520 aa4.77□□□□□ -1.65
GAPLINC-202ENST00000579007 MBNL1Q9NR56 388 aaKnown RBP4.77□□□□□ -1.65
GAPLINC-202ENST00000579007 PAPOLBQ9NRJ5 636 aaKnown RBP4.77□□□□□ -1.65
GAPLINC-202ENST00000579007 SPATS2LQ9NUQ6 558 aaKnown RBP4.77□□□□□ -1.65
GAPLINC-202ENST00000579007 TMEM248Q9NWD8 314 aa4.77□□□□□ -1.65
GAPLINC-202ENST00000579007 XPR1Q9UBH6 696 aa4.77□□□□□ -1.65
GAPLINC-202ENST00000579007 APOBEC3BQ9UH17 382 aaKnown RBP4.77□□□□□ -1.65
GAPLINC-202ENST00000579007 PCSK1NQ9UHG2 260 aa4.77□□□□□ -1.65
GAPLINC-202ENST00000579007 DNAI1Q9UI46 699 aa4.77□□□□□ -1.65
GAPLINC-202ENST00000579007 DUSP13Q9UII6 198 aa4.77□□□□□ -1.65
GAPLINC-202ENST00000579007 LRRK2Q5S007 2527 aa4.77□□□□□ -1.65
GAPLINC-202ENST00000579007 TSPAN11A1L157 253 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 EME2A4GXA9 379 aaPredicted RBP4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 URADA6NGE7 173 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 FADS2P1A8MWK0 482 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 A8MZ25 164 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 AKR1B15C9JRZ8 316 aaPredicted RBP4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 D6RAR5 112 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 NTN3O00634 580 aaPredicted RBP4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 RRP8O43159 456 aaKnown RBP4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 KIF5CO60282 957 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 RAMP2O60895 175 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 SMPD2O60906 423 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 TSC22D2O75157 780 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 PRKCGP05129 697 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 PDHA1P08559 390 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 GAAP10253 952 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 ALPPL2P10696 532 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 UNGP13051 313 aaPredicted RBP4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 IL4RP24394 825 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 MCM3P25205 808 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 RPL10P27635 214 aaKnown RBP4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 MSX2P35548 267 aaPredicted RBP4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 MMP12P39900 470 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 PTPN9P43378 593 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 MAPKAPK2P49137 400 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 DNA2P51530 1060 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 ARFIP1P53367 373 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 TMPRSS3P57727 454 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 ERVPABLB-1P60509 514 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 E2F1Q01094 437 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 CDR2Q01850 454 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 OGDHQ02218 1023 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 SF3A3Q12874 501 aaKnown RBP eCLIP4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 RALGDSQ12967 914 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 C1orf61Q13536 156 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 CAMK2DQ13557 499 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 LY6DQ14210 128 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 CSHL1Q14406 222 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 KRT31Q15323 416 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 ZNF750Q32MQ0 723 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 ARHGAP40Q5TG30 622 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 CDKAL1Q5VV42 579 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 C16orf87Q6PH81 154 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 LRRC31Q6UY01 552 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 CYP4V2Q6ZWL3 525 aaPredicted RBP4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 CHSY3Q70JA7 882 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 MON1BQ7L1V2 547 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 ARCQ7LC44 396 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 STRADAQ7RTN6 431 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 OTOAQ7RTW8 1153 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 TMPRSS9Q7Z410 1059 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 CLEC14AQ86T13 490 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 VPS36Q86VN1 386 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 PEX5LQ8IYB4 626 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 PELI3Q8N2H9 469 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 RTL3Q8N8U3 475 aaKnown RBP4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 MLKLQ8NB16 471 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 TNIP2Q8NFZ5 429 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 OR5AN1Q8NGI8 311 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 LMX1AQ8TE12 382 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 FAM172AQ8WUF8 416 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 FBLIM1Q8WUP2 373 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 KCNE4Q8WWG9 221 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 NTAN1Q96AB6 310 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 ISG20Q96AZ6 181 aaKnown RBP4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 ELP4Q96EB1 424 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 HMCESQ96FZ2 354 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 ZNF578Q96N58 590 aaPredicted RBP4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 JMJD8Q96S16 334 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 PEBP4Q96S96 227 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 AGAP2Q99490 1192 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 PIP5K1AQ99755 562 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 FAM118BQ9BPY3 351 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 CCDC3Q9BQI4 270 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 NAA11Q9BSU3 229 aaPredicted RBP4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 WRAP53Q9BUR4 548 aaKnown RBP4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 MLPHQ9BV36 600 aaPredicted RBP4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 SPATA5L1Q9BVQ7 753 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 OR10A5Q9H207 317 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 SLC25A32Q9H2D1 315 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 HSD3B7Q9H2F3 369 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 LDAHQ9H6V9 325 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 SYNPO2LQ9H987 977 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 VPS37BQ9H9H4 285 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 PLEKHA2Q9HB19 425 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 USP29Q9HBJ7 922 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 GPR35Q9HC97 309 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 PCDHB16Q9NRJ7 776 aa4.76□□□□□ -1.65
GAPLINC-202ENST00000579007 LEF1Q9UJU2 399 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms