RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 SPANXN3Q5MJ09 141 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 THEMIS2Q5TEJ8 643 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 YOD1Q5VVQ6 348 aaPredicted RBP12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 MRPL14Q6P1L8 145 aaKnown RBP12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 SYDE1Q6ZW31 735 aaPredicted RBP12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 NEK10Q6ZWH5 1172 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 ADCK2Q7Z695 626 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 FDCSPQ8NFU4 85 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 CD200R1Q8TD46 325 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 PTERQ96BW5 349 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 CFAP36Q96G28 342 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 FER1L6-AS2Q96M78 137 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 RUNDC3BQ96NL0 473 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 IP6K3Q96PC2 410 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 EBNA1BP2Q99848 306 aaKnown RBP12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 AARSD1Q9BTE6 412 aaKnown RBP12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 NUDT9Q9BW91 350 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 SLC6A20Q9NP91 592 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 SLC22A11Q9NSA0 550 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 GPR83Q9NYM4 423 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 RNF14Q9UBS8 474 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 TRMT6Q9UJA5 497 aaKnown RBP12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 MED16Q9Y2X0 877 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 DHRS7Q9Y394 339 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 MAU2Q9Y6X3 613 aa12.16□□□□□ -0.46
NPLOC4-213ENST00000573519 LOC105369274A0A096LPK9 316 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 LOC102723532A0A0G2JNH3 316 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 HYKKA2RU49 373 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 SMAPO00193 183 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 SRPX2O60687 465 aaPredicted RBP12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 CCNDBP1O95273 360 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 TTC4O95801 387 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 SLC16A8O95907 504 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 ERGP11308 486 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 ENO3P13929 434 aaPredicted RBP12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 ITGAXP20702 1163 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 HSD17B2P37059 387 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 GCGRP47871 477 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 OR1D4P47884 311 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 CARSP49589 748 aaKnown RBP12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 C2orf54Q08AI8 447 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 ARHGAP19Q14CB8 494 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 MORF4L2Q15014 288 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 NADK2Q4G0N4 442 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 UGT3A1Q6NUS8 523 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 HIBCHQ6NVY1 386 aaPredicted RBP12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 SHISA6Q6ZSJ9 500 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 UBE2R2Q712K3 238 aaPredicted RBP12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 RNF44Q7L0R7 432 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 PIWIL4Q7Z3Z4 852 aaKnown RBP12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 TMEM151BQ8IW70 566 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 OR4N4Q8N0Y3 316 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 PDIK1LQ8N165 341 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 DTWD1Q8N5C7 304 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 CLEC1AQ8NC01 280 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 C2CD4AQ8NCU7 369 aaPredicted RBP12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 ZNF480Q8WV37 535 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 ASB11Q8WXH4 323 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 COL26A1Q96A83 441 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 CABS1Q96KC9 395 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 ZFYVE21Q9BQ24 234 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 MFRPQ9BY79 579 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 SOX17Q9H6I2 414 aaPredicted RBP12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 P4HTMQ9NXG6 502 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 STOX2Q9P2F5 926 aaPredicted RBP12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 KLHL42Q9P2K6 505 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 CDC23Q9UJX2 597 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 CHMP2BQ9UQN3 213 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 PLAAQ9Y263 795 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 SNX24Q9Y343 169 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 ZNF451Q9Y4E5 1061 aa12.15□□□□□ -0.46
NPLOC4-213ENST00000573519 OR2A25A4D2G3 310 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 FITM1A5D6W6 292 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 TTLL8A6PVC2 850 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 EFCAB8A8MWE9 144 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 MASP2O00187 686 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 CEACAM4O75871 244 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 SEC31AO94979 1220 aaKnown RBP12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 IGHEP01854 428 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 UMODP07911 640 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 ELK3P41970 407 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 RPL21P46778 160 aaKnown RBP12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 FOXK1P85037 733 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 NKG7Q16617 165 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 DCAF10Q5QP82 559 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 ICE2Q659A1 982 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 CYHR1Q6ZMK1 362 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 COX15Q7KZN9 410 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 OVCH1Q7RTY7 1134 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 PPP1R32Q7Z5V6 425 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 PALM2Q8IXS6 379 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 SPATA4Q8NEY3 305 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 FKBP10Q96AY3 582 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 CERS2Q96G23 380 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 SNF8Q96H20 258 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 ZNF285Q96NJ3 590 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 PLCD4Q9BRC7 762 aa12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 WDR83Q9BRX9 315 aaKnown RBP12.14□□□□□ -0.47
NPLOC4-213ENST00000573519 NAT9Q9BTE0 207 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms