RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 PRRC2CQ9Y520 2896 aaKnown RBP16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 VSTM2BA6NLU5 285 aa16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 GOLGA8MH3BSY2 632 aa16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 AGPSO00116 658 aa16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 PEX12O00623 359 aa16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 DNALI1O14645 258 aaPredicted RBP16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 PGAM1P18669 254 aa16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 OTX2P32243 289 aa16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 PRDX1Q06830 199 aaKnown RBP16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 CTBP1Q13363 440 aa16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 FASTKQ14296 549 aaKnown RBP16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 MYBPC3Q14896 1274 aa16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 IGFBP7Q16270 282 aa16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 NKG7Q16617 165 aa16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 ZNF425Q6IV72 752 aa16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 PRMT9Q6P2P2 845 aa16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 PAQR7Q86WK9 346 aa16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 CNTN4Q8IWV2 1026 aa16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 CLEC1AQ8NC01 280 aa16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 GABPB2Q8TAK5 448 aaPredicted RBP16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 CD200R1Q8TD46 325 aa16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 INPP5DQ92835 1189 aa16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 PNPLA2Q96AD5 504 aa16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 MVB12AQ96EY5 273 aa16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 SLC30A3Q99726 388 aa16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 PLCD4Q9BRC7 762 aa16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 CCDC68Q9H2F9 335 aa16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 C20orf96Q9NUD7 363 aaPredicted RBP16.34■□□□□ 0.21
MAP1LC3B-208ENST00000570189 HECTD1Q9ULT8 2610 aa16.33■□□□□ 0.21
MAP1LC3B-208ENST00000570189 IGLV3-12A0A075B6K2 115 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 IGKV1-8A0A0C4DH67 115 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 KRT87PA6NCN2 255 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 E7ENX8 843 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 SMAPO00193 183 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 ZNF185O15231 689 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 CCNDBP1O95273 360 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 SLC16A8O95907 504 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 ALAS2P22557 587 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 IVDP26440 423 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 VARSP26640 1264 aaKnown RBP16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 TERF1P54274 439 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 PNLIPRP1P54315 467 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 ABATP80404 500 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 TAP2Q03519 686 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 CRYMQ14894 314 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 PRTGQ2VWP7 1150 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 NADK2Q4G0N4 442 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 WASHC2DQ5SRD0 308 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 FRMPD2BQ6IN97 320 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 JMJD6Q6NYC1 403 aaPredicted RBP16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 FBXO42Q6P3S6 717 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 CYHR1Q6ZMK1 362 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 KIAA0408Q6ZU52 694 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 KCNMB4Q86W47 210 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 ATCAYQ86WG3 371 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 LRRC56Q8IYG6 542 aaPredicted RBP16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 GALNT16Q8N428 558 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 C2CD4AQ8NCU7 369 aaPredicted RBP16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 GALNT11Q8NCW6 608 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 FAM136AQ96C01 138 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 PKP4Q99569 1192 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 AARSD1Q9BTE6 412 aaKnown RBP16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 DPH7Q9BTV6 452 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 SLC6A20Q9NP91 592 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 MRPS30Q9NP92 439 aaKnown RBP16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 FBXO6Q9NRD1 293 aaPredicted RBP16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 UTP6Q9NYH9 597 aaKnown RBP16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 PLAAQ9Y263 795 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 MAD1L1Q9Y6D9 718 aa16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 RP1L1Q8IWN7 2480 aaPredicted RBP16.33■□□□□ 0.2
MAP1LC3B-208ENST00000570189 HYKKA2RU49 373 aa16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 VPS26AO75436 327 aa16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 IPO13O94829 963 aaKnown RBP16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 EZRP15311 586 aaKnown RBP16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 MCM3P25205 808 aa16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 RPA3P35244 121 aaPredicted RBP16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 MLLT10P55197 1068 aa16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 VSX2P58304 361 aaPredicted RBP16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 AIMP2Q13155 320 aaKnown RBP16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 SLC9A5Q14940 896 aa16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 PPP1R7Q15435 360 aa16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 MUM1Q2TAK8 710 aa16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 GARNL3Q5VVW2 1013 aa16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 ICE2Q659A1 982 aa16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 SYDE1Q6ZW31 735 aaPredicted RBP16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 ARHGEF39Q8N4T4 335 aa16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 RBMXL3Q8N7X1 1067 aaKnown RBP16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 Q8NA96 180 aa16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 ZNF480Q8WV37 535 aa16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 GPR21Q99679 349 aa16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 EBNA1BP2Q99848 306 aaKnown RBP16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 SEMA3GQ9NS98 782 aa16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 MAP4K5Q9Y4K4 846 aa16.32■□□□□ 0.2
MAP1LC3B-208ENST00000570189 USP9XQ93008 2570 aaPredicted RBP16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 LOC105369274A0A096LPK9 316 aa16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 LOC102723532A0A0G2JNH3 316 aa16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 A0A1W2PQ72 361 aa16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 TTLL8A6PVC2 850 aa16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 SOCS6O14544 535 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms