RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 WDR47O94967 919 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 NPPBP16860 134 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 NELFEP18615 380 aaKnown RBP16.12■□□□□ 0.17
COMMD4-224ENST00000568877 MAGP20916 626 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 GRIA3P42263 894 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 HSPA7P48741 367 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 HSD11B2P80365 405 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 EIF3IQ13347 325 aaKnown RBP16.12■□□□□ 0.17
COMMD4-224ENST00000568877 SETDB1Q15047 1291 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 CCDC153Q494R4 210 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 FBXO48Q5FWF7 155 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 RAB11FIP2Q7L804 512 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 C19orf47Q8N9M1 422 aaKnown RBP16.12■□□□□ 0.17
COMMD4-224ENST00000568877 UBTD2Q8WUN7 234 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 ZUFSPQ96AP4 578 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 ESAMQ96AP7 390 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 HAUS8Q9BT25 410 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 CD244Q9BZW8 370 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 IQCGQ9H095 443 aaKnown RBP16.12■□□□□ 0.17
COMMD4-224ENST00000568877 SOHLH2Q9NX45 425 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 WASF3Q9UPY6 502 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 BTRCQ9Y297 605 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 KLHL20Q9Y2M5 609 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 KLK4Q9Y5K2 254 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 UNC13CQ8NB66 2214 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 MAP3K7O43318 606 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 PLIN3O60664 434 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 PRAMEF10O60809 474 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 STK16O75716 305 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 PROCP04070 461 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 ADRB1P08588 477 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 TAC1P20366 129 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 AGTR2P50052 363 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 NAA25Q14CX7 972 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 ZIC1Q15915 447 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 FCRL6Q6DN72 434 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 FIGLAQ6QHK4 219 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 C17orf64Q86WR6 236 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 D2HGDHQ8N465 521 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 PTGR2Q8N8N7 351 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-224ENST00000568877 WDR36Q8NI36 951 aaKnown RBP16.11■□□□□ 0.17
COMMD4-224ENST00000568877 PHF21BQ96EK2 531 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 TCTN2Q96GX1 697 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 C12orf65Q9H3J6 166 aaKnown RBP16.11■□□□□ 0.17
COMMD4-224ENST00000568877 PDE7BQ9NP56 450 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 SLC6A20Q9NP91 592 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 KLK13Q9UKR3 277 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 PLLPQ9Y342 182 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 DYRK1BQ9Y463 629 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 LOXL2Q9Y4K0 774 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 TNPO3Q9Y5L0 923 aaKnown RBP16.11■□□□□ 0.17
COMMD4-224ENST00000568877 ACTL7BQ9Y614 415 aa16.11■□□□□ 0.17
COMMD4-224ENST00000568877 CNOT1A5YKK6 2376 aaKnown RBP16.11■□□□□ 0.17
COMMD4-224ENST00000568877 IGKV1-8A0A0C4DH67 115 aa16.1■□□□□ 0.17
COMMD4-224ENST00000568877 EFCAB7A8K855 629 aa16.1■□□□□ 0.17
COMMD4-224ENST00000568877 A8MT66 165 aa16.1■□□□□ 0.17
COMMD4-224ENST00000568877 STX16-NPEPL1H3BU86 382 aa16.1■□□□□ 0.17
COMMD4-224ENST00000568877 STX16O14662 325 aa16.1■□□□□ 0.17
COMMD4-224ENST00000568877 TYROBPO43914 113 aa16.1■□□□□ 0.17
COMMD4-224ENST00000568877 CCNT2O60583 730 aaKnown RBP16.1■□□□□ 0.17
COMMD4-224ENST00000568877 SASH3O75995 380 aa16.1■□□□□ 0.17
COMMD4-224ENST00000568877 ATP5F1P24539 256 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-224ENST00000568877 PCBP2Q15366 365 aaKnown RBP eCLIP16.1■□□□□ 0.171e-11■■■■■ 48
COMMD4-224ENST00000568877 TMTC4Q5T4D3 741 aa16.1■□□□□ 0.17
COMMD4-224ENST00000568877 LRRC70Q7Z2Q7 622 aa16.1■□□□□ 0.17
COMMD4-224ENST00000568877 TCP10LQ8TDR4 215 aa16.1■□□□□ 0.17
COMMD4-224ENST00000568877 DPH7Q9BTV6 452 aa16.1■□□□□ 0.17
COMMD4-224ENST00000568877 SCNM1Q9BWG6 230 aa16.1■□□□□ 0.17
COMMD4-224ENST00000568877 CHRNA10Q9GZZ6 450 aa16.1■□□□□ 0.17
COMMD4-224ENST00000568877 SSU72Q9NP77 194 aaKnown RBP16.1■□□□□ 0.17
COMMD4-224ENST00000568877 DNAJC11Q9NVH1 559 aa16.1■□□□□ 0.17
COMMD4-224ENST00000568877 OCIAD1Q9NX40 245 aa16.1■□□□□ 0.17
COMMD4-224ENST00000568877 ANKMY1Q9P2S6 941 aa16.1■□□□□ 0.17
COMMD4-224ENST00000568877 SNX7Q9UNH6 387 aa16.1■□□□□ 0.17
COMMD4-224ENST00000568877 SH2B3Q9UQQ2 575 aa16.1■□□□□ 0.17
COMMD4-224ENST00000568877 ASB1Q9Y576 335 aa16.1■□□□□ 0.17
COMMD4-224ENST00000568877 KCNE2Q9Y6J6 123 aa16.1■□□□□ 0.17
COMMD4-224ENST00000568877 A0A1W2PNU3 283 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-224ENST00000568877 G3V2L1 256 aa16.09■□□□□ 0.17
COMMD4-224ENST00000568877 K7EPI3 171 aa16.09■□□□□ 0.17
COMMD4-224ENST00000568877 PLD2O14939 933 aa16.09■□□□□ 0.17
COMMD4-224ENST00000568877 DLX3O60479 287 aa16.09■□□□□ 0.17
COMMD4-224ENST00000568877 SIX3O95343 332 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-224ENST00000568877 JMJD7P0C870 316 aa16.09■□□□□ 0.17
COMMD4-224ENST00000568877 CDH1P12830 882 aa16.09■□□□□ 0.17
COMMD4-224ENST00000568877 CCL4P13236 92 aa16.09■□□□□ 0.17
COMMD4-224ENST00000568877 HGFP14210 728 aa16.09■□□□□ 0.17
COMMD4-224ENST00000568877 FOLR1P15328 257 aa16.09■□□□□ 0.17
COMMD4-224ENST00000568877 SPINK2P20155 84 aa16.09■□□□□ 0.17
COMMD4-224ENST00000568877 HRH2P25021 359 aa16.09■□□□□ 0.17
COMMD4-224ENST00000568877 MLLT3P42568 568 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-224ENST00000568877 SH3BP2P78314 561 aa16.09■□□□□ 0.17
COMMD4-224ENST00000568877 NFKB2Q00653 900 aa16.09■□□□□ 0.17
COMMD4-224ENST00000568877 CDC16Q13042 620 aa16.09■□□□□ 0.17
COMMD4-224ENST00000568877 KCNAB1Q14722 419 aa16.09■□□□□ 0.17
COMMD4-224ENST00000568877 C3orf38Q5JPI3 329 aa16.09■□□□□ 0.17
COMMD4-224ENST00000568877 AGBL2Q5U5Z8 902 aa16.09■□□□□ 0.17
COMMD4-224ENST00000568877 ZNF425Q6IV72 752 aa16.09■□□□□ 0.17
COMMD4-224ENST00000568877 METTL2BQ6P1Q9 378 aaKnown RBP16.09■□□□□ 0.17
COMMD4-224ENST00000568877 ZYG11AQ6WRX3 759 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms