RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	TEX19	Q8NA77	164 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	FBXO15	Q8NCQ5	510 aa	Predicted RBP	6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	OR2L3	Q8NG85	312 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	KCNJ9	Q92806	393 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	PTER	Q96BW5	349 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	CAPZA3	Q96KX2	299 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	RUNDC3B	Q96NL0	473 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	PKP4	Q99569	1192 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	SLC30A3	Q99726	388 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	NAPG	Q99747	312 aa	Predicted RBP	6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	SELENOS	Q9BQE4	189 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	DPH7	Q9BTV6	452 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	SLC25A23	Q9BV35	468 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	ENAM	Q9NRM1	1142 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	IARS2	Q9NSE4	1012 aa	Known RBP	6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	CUTC	Q9NTM9	273 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	NDOR1	Q9UHB4	597 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	G3BP2	Q9UN86	482 aa	Known RBP	6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	MED16	Q9Y2X0	877 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	PTRH2	Q9Y3E5	179 aa	Known RBP	6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	PCDHGA9	Q9Y5G4	932 aa	Known RBP	6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	SAR1B	Q9Y6B6	198 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	FLNC	Q14315	2725 aa		6.63	□□□□□ -1.35
SF3B3-209	ENST00000567635	HIVEP3	Q5T1R4	2406 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	SPTBN1	Q01082	2364 aa	Known RBP	6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	DIDO1	Q9BTC0	2240 aa	Known RBP	6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	SETX	Q7Z333	2677 aa	Known RBP	6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	LOC105369274	A0A096LPK9	316 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	LOC102723532	A0A0G2JNH3	316 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635		A0A0J9YVX5	310 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635		A0A1B0GX78	115 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	HYKK	A2RU49	373 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	OR2A25	A4D2G3	310 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	FITM1	A5D6W6	292 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635		A6NL46	340 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	SMAP	O00193	183 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	EIF3F	O00303	357 aa	Predicted RBP	6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	PEX12	O00623	359 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	DSCR3	O14972	297 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	BANF1	O75531	89 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	CEACAM4	O75871	244 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	SLC16A8	O95907	504 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	SYF2	O95926	243 aa	Known RBP	6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	IGHE	P01854	428 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	AHSG	P02765	367 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	ALB	P02768	609 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	TUBB4A	P04350	444 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	F7	P08709	466 aa	Predicted RBP	6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	ERG	P11308	486 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	MCM3	P25205	808 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	ELK3	P41970	407 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	GCGR	P47871	477 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	YBX1	P67809	324 aa	Known RBP	6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	MPP1	Q00013	466 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	DR1	Q01658	176 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	PRDX1	Q06830	199 aa	Known RBP	6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	DHX9	Q08211	1270 aa	Known RBP	6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	CUL1	Q13616	776 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	TSTA3	Q13630	321 aa	Predicted RBP	6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	ATP1A4	Q13733	1029 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	CRYM	Q14894	314 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	SLC9A5	Q14940	896 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	MORF4L2	Q15014	288 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	BBS9	Q3SYG4	887 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	CPZ	Q66K79	652 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	MRPL14	Q6P1L8	145 aa	Known RBP	6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	SUSD1	Q6UWL2	747 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	KIAA0408	Q6ZU52	694 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	IGDCC3	Q8IVU1	814 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	OR4N4	Q8N0Y3	316 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	PDIK1L	Q8N165	341 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	C17orf53	Q8N3J3	647 aa	Predicted RBP	6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	TTC29	Q8NA56	475 aa	Predicted RBP	6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	C2CD4A	Q8NCU7	369 aa	Predicted RBP	6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	OR2Y1	Q8NGV0	311 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	GIMAP7	Q8NHV1	300 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	CD200R1	Q8TD46	325 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	MCOLN3	Q8TDD5	553 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	EEF1AKMT1	Q8WVE0	214 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	FKBP10	Q96AY3	582 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	FER1L6-AS2	Q96M78	137 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	ZNF285	Q96NJ3	590 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	GPR21	Q99679	349 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	PLCD4	Q9BRC7	762 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	AARSD1	Q9BTE6	412 aa	Known RBP	6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	ACAT2	Q9BWD1	397 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	EPN3	Q9H201	632 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	WDR54	Q9H977	334 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	MLXIPL	Q9NP71	852 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	MRPS30	Q9NP92	439 aa	Known RBP	6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	SLC22A11	Q9NSA0	550 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	UTP6	Q9NYH9	597 aa	Known RBP	6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	TAS2R13	Q9NYV9	303 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	ANKMY1	Q9P2S6	941 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	RNF14	Q9UBS8	474 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	ZC3H7B	Q9UGR2	993 aa	Known RBP	6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	ZNF451	Q9Y4E5	1061 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	PCDHGB7	Q9Y5F8	929 aa		6.62	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms