RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 MEF2AQ02078 507 aaPredicted RBP17.08■□□□□ 0.33
HERC2-208ENST00000566635 PCDH1Q08174 1060 aa17.08■□□□□ 0.33
HERC2-208ENST00000566635 SQLEQ14534 574 aa17.08■□□□□ 0.33
HERC2-208ENST00000566635 ATP6AP1LQ52LC2 224 aa17.08■□□□□ 0.33
HERC2-208ENST00000566635 TJAP1Q5JTD0 557 aa17.08■□□□□ 0.33
HERC2-208ENST00000566635 FRG2Q64ET8 278 aa17.08■□□□□ 0.33
HERC2-208ENST00000566635 RNF165Q6ZSG1 346 aa17.08■□□□□ 0.33
HERC2-208ENST00000566635 KIF2BQ8N4N8 673 aa17.08■□□□□ 0.33
HERC2-208ENST00000566635 RAB42Q8N4Z0 105 aa17.08■□□□□ 0.33
HERC2-208ENST00000566635 DNASE2BQ8WZ79 361 aa17.08■□□□□ 0.33
HERC2-208ENST00000566635 SMPDL3AQ92484 453 aa17.08■□□□□ 0.33
HERC2-208ENST00000566635 SH3KBP1Q96B97 665 aa17.08■□□□□ 0.33
HERC2-208ENST00000566635 CXorf40BQ96DE9 158 aa17.08■□□□□ 0.33
HERC2-208ENST00000566635 FRG2BQ96QU4 278 aa17.08■□□□□ 0.33
HERC2-208ENST00000566635 ACPTQ9BZG2 426 aa17.08■□□□□ 0.33
HERC2-208ENST00000566635 KIR3DX1Q9H7L2 352 aa17.08■□□□□ 0.33
HERC2-208ENST00000566635 PFDN4Q9NQP4 134 aa17.08■□□□□ 0.33
HERC2-208ENST00000566635 GEMIN8Q9NWZ8 242 aaKnown RBP17.08■□□□□ 0.33
HERC2-208ENST00000566635 COLEC10Q9Y6Z7 277 aa17.08■□□□□ 0.33
HERC2-208ENST00000566635 KNL1Q8NG31 2342 aa17.08■□□□□ 0.32
HERC2-208ENST00000566635 NCOR1O75376 2440 aa17.08■□□□□ 0.32
HERC2-208ENST00000566635 CCDC163A0A0D9SF12 145 aa17.08■□□□□ 0.32
HERC2-208ENST00000566635 ZNF839A8K0R7 811 aa17.08■□□□□ 0.32
HERC2-208ENST00000566635 CSNK1EP49674 416 aaKnown RBP17.08■□□□□ 0.32
HERC2-208ENST00000566635 BLKP51451 505 aa17.08■□□□□ 0.32
HERC2-208ENST00000566635 NME5P56597 212 aa17.08■□□□□ 0.32
HERC2-208ENST00000566635 E2F2Q14209 437 aa17.08■□□□□ 0.32
HERC2-208ENST00000566635 SLBPQ14493 270 aaKnown RBP eCLIP17.08■□□□□ 0.32
HERC2-208ENST00000566635 C6orf136Q5SQH8 315 aa17.08■□□□□ 0.32
HERC2-208ENST00000566635 ATG9BQ674R7 924 aa17.08■□□□□ 0.32
HERC2-208ENST00000566635 OGFOD2Q6N063 350 aa17.08■□□□□ 0.32
HERC2-208ENST00000566635 TRIM46Q7Z4K8 759 aa17.08■□□□□ 0.32
HERC2-208ENST00000566635 WDR5BQ86VZ2 330 aa17.08■□□□□ 0.32
HERC2-208ENST00000566635 TMEM105Q8N8V8 129 aa17.08■□□□□ 0.32
HERC2-208ENST00000566635 OR2L8Q8NGY9 312 aa17.08■□□□□ 0.32
HERC2-208ENST00000566635 FBXO27Q8NI29 283 aa17.08■□□□□ 0.32
HERC2-208ENST00000566635 CUEDC1Q9NWM3 386 aaPredicted RBP17.08■□□□□ 0.32
HERC2-208ENST00000566635 PCM1Q15154 2024 aa17.07■□□□□ 0.32
HERC2-208ENST00000566635 ZDBF2Q9HCK1 2354 aa17.07■□□□□ 0.32
HERC2-208ENST00000566635 LOC100653049A0A140TA62 436 aa17.07■□□□□ 0.32
HERC2-208ENST00000566635 RGS14O43566 566 aa17.07■□□□□ 0.32
HERC2-208ENST00000566635 ATP5HO75947 161 aa17.07■□□□□ 0.32
HERC2-208ENST00000566635 KRT34O76011 436 aa17.07■□□□□ 0.32
HERC2-208ENST00000566635 CSF2P04141 144 aa17.07■□□□□ 0.32
HERC2-208ENST00000566635 NME1P15531 152 aaKnown RBP17.07■□□□□ 0.32
HERC2-208ENST00000566635 HNF4AP41235 474 aa17.07■□□□□ 0.32
HERC2-208ENST00000566635 CASP2P42575 452 aa17.07■□□□□ 0.32
HERC2-208ENST00000566635 NXPH1P58417 271 aa17.07■□□□□ 0.32
HERC2-208ENST00000566635 CSTF1Q05048 431 aaKnown RBP17.07■□□□□ 0.32
HERC2-208ENST00000566635 ACTN3Q08043 901 aaPredicted RBP17.07■□□□□ 0.32
HERC2-208ENST00000566635 DDX39BQ13838 428 aaKnown RBP17.07■□□□□ 0.32
HERC2-208ENST00000566635 IMPG1Q17R60 797 aa17.07■□□□□ 0.32
HERC2-208ENST00000566635 KIF19Q2TAC6 998 aa17.07■□□□□ 0.32
HERC2-208ENST00000566635 NXPE4Q6UWF7 544 aa17.07■□□□□ 0.32
HERC2-208ENST00000566635 GK5Q6ZS86 529 aa17.07■□□□□ 0.32
HERC2-208ENST00000566635 FNDC5Q8NAU1 212 aa17.07■□□□□ 0.32
HERC2-208ENST00000566635 OR9I1Q8NGQ6 314 aa17.07■□□□□ 0.32
HERC2-208ENST00000566635 WDR20Q8TBZ3 569 aa17.07■□□□□ 0.32
HERC2-208ENST00000566635 SETD7Q8WTS6 366 aaKnown RBP17.07■□□□□ 0.32
HERC2-208ENST00000566635 MAGEB10Q96LZ2 347 aaPredicted RBP17.07■□□□□ 0.32
HERC2-208ENST00000566635 HAUS8Q9BT25 410 aa17.07■□□□□ 0.32
HERC2-208ENST00000566635 RAB11FIP5Q9BXF6 653 aa17.07■□□□□ 0.32
HERC2-208ENST00000566635 SLC28A1O00337 649 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 C1GALT1C1LP0DN25 315 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 COX4I1P13073 169 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 ERVK-8P63133 956 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 RPL38P63173 70 aaKnown RBP17.06■□□□□ 0.32
HERC2-208ENST00000566635 AP5B1Q2VPB7 878 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 IYDQ6PHW0 289 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 RINLQ6ZS11 566 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 ASRGL1Q7L266 308 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 LPCAT2Q7L5N7 544 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 SNX32Q86XE0 403 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 C1orf210Q8IVY1 113 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 WDR34Q96EX3 536 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 POLR3HQ9Y535 204 aaPredicted RBP17.06■□□□□ 0.32
HERC2-208ENST00000566635 TNRC6BQ9UPQ9 1833 aaKnown RBP17.06■□□□□ 0.32
HERC2-208ENST00000566635 PIPSLA2A3N6 862 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 H0YIV9 168 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 BCAT2O15382 392 aaPredicted RBP17.06■□□□□ 0.32
HERC2-208ENST00000566635 PCNAP12004 261 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 PEBP1P30086 187 aaKnown RBP17.06■□□□□ 0.32
HERC2-208ENST00000566635 RFTN2Q52LD8 501 aaPredicted RBP17.06■□□□□ 0.32
HERC2-208ENST00000566635 WDR45BQ5MNZ6 344 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 PAOXQ6QHF9 649 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 LONP2Q86WA8 852 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 FAM20CQ8IXL6 584 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 NAGSQ8N159 534 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 KLHL29Q96CT2 875 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 MTERF1Q99551 399 aaKnown RBP17.06■□□□□ 0.32
HERC2-208ENST00000566635 TUBB6Q9BUF5 446 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 LRMDAQ9H2I8 198 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 AIG1Q9NVV5 245 aa17.06■□□□□ 0.32
HERC2-208ENST00000566635 PSMD12O00232 456 aaPredicted RBP17.05■□□□□ 0.32
HERC2-208ENST00000566635 SLC22A2O15244 555 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 NDUFS1P28331 727 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 ATP4BP51164 291 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 STX1BP61266 288 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 SPATA19Q7Z5L4 167 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 C17orf64Q86WR6 236 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms