RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 SSPNQ14714 243 aa12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 LACTB2Q53H82 288 aaPredicted RBP12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 C1orf189Q5VU69 101 aa12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 MRPL14Q6P1L8 145 aaKnown RBP12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 FBXO42Q6P3S6 717 aa12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 ATG14Q6ZNE5 492 aa12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 MAATS1Q7Z4T9 603 aa12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 CPNE9Q8IYJ1 553 aa12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 SPATA4Q8NEY3 305 aa12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 MCOLN3Q8TDD5 553 aa12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 ZNF480Q8WV37 535 aa12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 EEF1AKMT1Q8WVE0 214 aa12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 NACC2Q96BF6 587 aa12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 PWWP2AQ96N64 755 aa12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 SELENOSQ9BQE4 189 aa12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 WDR83Q9BRX9 315 aaKnown RBP12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 DPH7Q9BTV6 452 aa12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 MRPS30Q9NP92 439 aaKnown RBP12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 IRAK4Q9NWZ3 460 aa12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 IFT80Q9P2H3 777 aaPredicted RBP12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 GPN3Q9UHW5 284 aaPredicted RBP12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 TLK1Q9UKI8 766 aa12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 CHMP2BQ9UQN3 213 aa12.11□□□□□ -0.47
LPCAT4-206ENST00000566581 DSCR3O14972 297 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 SLC16A5O15375 505 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 SLC28A2O43868 658 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 CCNDBP1O95273 360 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 ALBP02768 609 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 C8GP07360 202 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 PIM1P11309 404 aaPredicted RBP12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 ALAS2P22557 587 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 MCM3P25205 808 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 CASQ1P31415 396 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 RPL21P46778 160 aaKnown RBP12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 EMP3P54852 163 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 CDKN2DP55273 166 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 ABATP80404 500 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 SP140Q13342 867 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 WASHC2DQ5SRD0 308 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 HP1BP3Q5SSJ5 553 aaPredicted RBP12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 MLIPQ5VWP3 458 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 ICE2Q659A1 982 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 ZNF425Q6IV72 752 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 TRMT10BQ6PF06 316 aaKnown RBP12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 PAQR3Q6TCH7 311 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 SUSD1Q6UWL2 747 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 TTLL10Q6ZVT0 673 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 UBE2R2Q712K3 238 aaPredicted RBP12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 MED25Q71SY5 747 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 RNF44Q7L0R7 432 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 OVCH1Q7RTY7 1134 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 PIWIL4Q7Z3Z4 852 aaKnown RBP12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 RAB43Q86YS6 212 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 LRRC56Q8IYG6 542 aaPredicted RBP12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 TMEM102Q8N9M5 508 aaPredicted RBP12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 OR2Y1Q8NGV0 311 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 FKBP10Q96AY3 582 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 PTERQ96BW5 349 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 CFAP36Q96G28 342 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 NDNQ99608 321 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 ZFYVE21Q9BQ24 234 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 PLCD4Q9BRC7 762 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 ERP44Q9BS26 406 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 ACAT2Q9BWD1 397 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 TRIM55Q9BYV6 548 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 TRIM31Q9BZY9 425 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 ING2Q9H160 280 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 PARVBQ9HBI1 364 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 MLXIPLQ9NP71 852 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 SLC6A20Q9NP91 592 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 PPANQ9NQ55 473 aaKnown RBP12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 ZNF71Q9NQZ8 489 aaPredicted RBP12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 CUTCQ9NTM9 273 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 UTP6Q9NYH9 597 aaKnown RBP12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 MOCS1Q9NZB8 636 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 WHRNQ9P202 907 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 ANAPC2Q9UJX6 822 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 PCDHGA9Q9Y5G4 932 aaKnown RBP12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 ESPL1Q14674 2120 aa12.1□□□□□ -0.47
LPCAT4-206ENST00000566581 ASH1LQ9NR48 2969 aaKnown RBP12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 PCSK5Q92824 1860 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 IGKV1-8A0A0C4DH67 115 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 CEACAM4O75871 244 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 ITGAXP20702 1163 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 IMPA1P29218 277 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 RRADP55042 308 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 VSX2P58304 361 aaPredicted RBP12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 YBX1P67809 324 aaKnown RBP12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 MGAT5Q09328 741 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 ILF2Q12905 390 aaKnown RBP12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 PDIA2Q13087 525 aaKnown RBP12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 RBM20Q5T481 1227 aaKnown RBP12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 FAM69BQ5VUD6 431 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 FRMPD2BQ6IN97 320 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 PRICKLE2Q7Z3G6 844 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 PAQR7Q86WK9 346 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 PALM2Q8IXS6 379 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 TTC29Q8NA56 475 aaPredicted RBP12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 PDLIM5Q96HC4 596 aaKnown RBP12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 CCDC138Q96M89 665 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms