RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 RPA3P35244 121 aaPredicted RBP19.29■□□□□ 0.68
CLN6-207ENST00000566347 FOXL2P58012 376 aa19.29■□□□□ 0.68
CLN6-207ENST00000566347 SRSF1Q07955 248 aaKnown RBP eCLIP19.29■□□□□ 0.68
CLN6-207ENST00000566347 AIMP2Q13155 320 aaKnown RBP19.29■□□□□ 0.68
CLN6-207ENST00000566347 FASTKQ14296 549 aaKnown RBP19.29■□□□□ 0.68
CLN6-207ENST00000566347 FRMPD2BQ6IN97 320 aa19.29■□□□□ 0.68
CLN6-207ENST00000566347 COX15Q7KZN9 410 aa19.29■□□□□ 0.68
CLN6-207ENST00000566347 Q8NA96 180 aa19.29■□□□□ 0.68
CLN6-207ENST00000566347 CALML6Q8TD86 181 aa19.29■□□□□ 0.68
CLN6-207ENST00000566347 KCNJ9Q92806 393 aa19.29■□□□□ 0.68
CLN6-207ENST00000566347 SPSB2Q99619 263 aa19.29■□□□□ 0.68
CLN6-207ENST00000566347 ZFYVE21Q9BQ24 234 aa19.29■□□□□ 0.68
CLN6-207ENST00000566347 DPH7Q9BTV6 452 aa19.29■□□□□ 0.68
CLN6-207ENST00000566347 MRPS30Q9NP92 439 aaKnown RBP19.29■□□□□ 0.68
CLN6-207ENST00000566347 UTP6Q9NYH9 597 aaKnown RBP19.29■□□□□ 0.68
CLN6-207ENST00000566347 COMMD10Q9Y6G5 202 aa19.29■□□□□ 0.68
CLN6-207ENST00000566347 NAV2Q8IVL1 2488 aa19.29■□□□□ 0.68
CLN6-207ENST00000566347 SHANK1Q9Y566 2161 aa19.29■□□□□ 0.68
CLN6-207ENST00000566347 USP9YO00507 2555 aaPredicted RBP19.28■□□□□ 0.68
CLN6-207ENST00000566347 ZCWPW2A0A1B0GU75 182 aa19.28■□□□□ 0.68
CLN6-207ENST00000566347 VPS26AO75436 327 aa19.28■□□□□ 0.68
CLN6-207ENST00000566347 CCNDBP1O95273 360 aa19.28■□□□□ 0.68
CLN6-207ENST00000566347 ERVK-10P10266 1014 aa19.28■□□□□ 0.68
CLN6-207ENST00000566347 MAGEA3P43357 314 aa19.28■□□□□ 0.68
CLN6-207ENST00000566347 OR1D4P47884 311 aa19.28■□□□□ 0.68
CLN6-207ENST00000566347 FNTAP49354 379 aa19.28■□□□□ 0.68
CLN6-207ENST00000566347 LONRF1Q17RB8 773 aa19.28■□□□□ 0.68
CLN6-207ENST00000566347 PRMT9Q6P2P2 845 aa19.28■□□□□ 0.68
CLN6-207ENST00000566347 IGFL3Q6UXB1 125 aa19.28■□□□□ 0.68
CLN6-207ENST00000566347 REXO1L1PQ8IX06 675 aa19.28■□□□□ 0.68
CLN6-207ENST00000566347 FBXO15Q8NCQ5 510 aaPredicted RBP19.28■□□□□ 0.68
CLN6-207ENST00000566347 ACTRT1Q8TDG2 376 aa19.28■□□□□ 0.68
CLN6-207ENST00000566347 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.28■□□□□ 0.68
CLN6-207ENST00000566347 ACAT2Q9BWD1 397 aa19.28■□□□□ 0.68
CLN6-207ENST00000566347 SLC29A3Q9BZD2 475 aa19.28■□□□□ 0.68
CLN6-207ENST00000566347 ZNF552Q9H707 407 aaPredicted RBP19.28■□□□□ 0.68
CLN6-207ENST00000566347 SEMA3GQ9NS98 782 aa19.28■□□□□ 0.68
CLN6-207ENST00000566347 LUZP4Q9P127 313 aa19.28■□□□□ 0.68
CLN6-207ENST00000566347 ZC3H7BQ9UGR2 993 aaKnown RBP19.28■□□□□ 0.68
CLN6-207ENST00000566347 FBXL4Q9UKA2 621 aa19.28■□□□□ 0.68
CLN6-207ENST00000566347 MAD1L1Q9Y6D9 718 aa19.28■□□□□ 0.68
CLN6-207ENST00000566347 LOC105369274A0A096LPK9 316 aa19.27■□□□□ 0.68
CLN6-207ENST00000566347 LOC102723532A0A0G2JNH3 316 aa19.27■□□□□ 0.68
CLN6-207ENST00000566347 KIF5CO60282 957 aa19.27■□□□□ 0.68
CLN6-207ENST00000566347 EIF2S1P05198 315 aaKnown RBP19.27■□□□□ 0.68
CLN6-207ENST00000566347 ENO3P13929 434 aaPredicted RBP19.27■□□□□ 0.68
CLN6-207ENST00000566347 GNLYP22749 145 aa19.27■□□□□ 0.68
CLN6-207ENST00000566347 UQCRFS1P47985 274 aa19.27■□□□□ 0.68
CLN6-207ENST00000566347 PNLIPRP1P54315 467 aa19.27■□□□□ 0.68
CLN6-207ENST00000566347 EMP3P54852 163 aa19.27■□□□□ 0.68
CLN6-207ENST00000566347 CTBP1Q13363 440 aa19.27■□□□□ 0.68
CLN6-207ENST00000566347 MUM1Q2TAK8 710 aa19.27■□□□□ 0.68
CLN6-207ENST00000566347 SUSD1Q6UWL2 747 aa19.27■□□□□ 0.68
CLN6-207ENST00000566347 DENND6AQ8IWF6 608 aa19.27■□□□□ 0.68
CLN6-207ENST00000566347 OR4N4Q8N0Y3 316 aa19.27■□□□□ 0.68
CLN6-207ENST00000566347 METTL27Q8N6F8 245 aaPredicted RBP19.27■□□□□ 0.68
CLN6-207ENST00000566347 NAT8LQ8N9F0 302 aa19.27■□□□□ 0.68
CLN6-207ENST00000566347 PKP4Q99569 1192 aa19.27■□□□□ 0.68
CLN6-207ENST00000566347 PLCD4Q9BRC7 762 aa19.27■□□□□ 0.68
CLN6-207ENST00000566347 ZNF304Q9HCX3 659 aa19.27■□□□□ 0.68
CLN6-207ENST00000566347 SLC6A20Q9NP91 592 aa19.27■□□□□ 0.68
CLN6-207ENST00000566347 FBXO6Q9NRD1 293 aaPredicted RBP19.27■□□□□ 0.68
CLN6-207ENST00000566347 C20orf96Q9NUD7 363 aaPredicted RBP19.27■□□□□ 0.68
CLN6-207ENST00000566347 CTSFQ9UBX1 484 aa19.27■□□□□ 0.68
CLN6-207ENST00000566347 B3GNT3Q9Y2A9 372 aa19.27■□□□□ 0.68
CLN6-207ENST00000566347 VSTM2BA6NLU5 285 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 SOCS6O14544 535 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 NRP2O60462 931 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 MPC1LP0DKB6 136 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 ITGA3P26006 1051 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 SLC1A2P43004 574 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 OCA2Q04671 838 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 TSTA3Q13630 321 aaPredicted RBP19.26■□□□□ 0.67
CLN6-207ENST00000566347 ESPL1Q14674 2120 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 RBBP7Q16576 425 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 FHL5Q5TD97 284 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 IRAK1BP1Q5VVH5 260 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 PRAMEF13Q5VWM6 474 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 FBXO42Q6P3S6 717 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 TMEM151BQ8IW70 566 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 PPIL6Q8IXY8 311 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 IQCKQ8N0W5 287 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 ZADH2Q8N4Q0 377 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 GIMAP7Q8NHV1 300 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 INPP5DQ92835 1189 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 COL26A1Q96A83 441 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 SIGLEC10Q96LC7 697 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 OSBPL9Q96SU4 736 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 SLC30A3Q99726 388 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 FAM167BQ9BTA0 163 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 SOX17Q9H6I2 414 aaPredicted RBP19.26■□□□□ 0.67
CLN6-207ENST00000566347 DHRS7Q9Y394 339 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 HS3ST3B1Q9Y662 390 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 MAU2Q9Y6X3 613 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 HEATR5BQ9P2D3 2071 aa19.26■□□□□ 0.67
CLN6-207ENST00000566347 SPTAN1Q13813 2472 aaKnown RBP19.25■□□□□ 0.67
CLN6-207ENST00000566347 CES2O00748 559 aa19.25■□□□□ 0.67
CLN6-207ENST00000566347 ZSCAN12O43309 604 aa19.25■□□□□ 0.67
CLN6-207ENST00000566347 SLC16A8O95907 504 aa19.25■□□□□ 0.67
CLN6-207ENST00000566347 CARSP49589 748 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms