RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 FAM214AQ32MH5 1076 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 ZNF470Q6ECI4 717 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 SUSD1Q6UWL2 747 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 IGFL3Q6UXB1 125 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 SHISA6Q6ZSJ9 500 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 DENND6AQ8IWF6 608 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 AGGF1Q8N302 714 aaeCLIP17.51■□□□□ 0.39
USB1-213ENST00000566292 MCUQ8NE86 351 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 GIMAP7Q8NHV1 300 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 NACC2Q96BF6 587 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 SERPINB12Q96P63 405 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 SOX17Q9H6I2 414 aaPredicted RBP17.51■□□□□ 0.39
USB1-213ENST00000566292 SYNPO2LQ9H987 977 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 ZBTB20Q9HC78 741 aaPredicted RBP17.51■□□□□ 0.39
USB1-213ENST00000566292 ATP13A2Q9NQ11 1180 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 INTS10Q9NVR2 710 aaKnown RBP17.51■□□□□ 0.39
USB1-213ENST00000566292 SAMD15Q9P1V8 674 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 STOX2Q9P2F5 926 aaPredicted RBP17.51■□□□□ 0.39
USB1-213ENST00000566292 ZC3H7BQ9UGR2 993 aaKnown RBP17.51■□□□□ 0.39
USB1-213ENST00000566292 CDC23Q9UJX2 597 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 FBXL4Q9UKA2 621 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 MED16Q9Y2X0 877 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 HS3ST3B1Q9Y662 390 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 MAU2Q9Y6X3 613 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 FAM169AQ9Y6X4 670 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 ZCWPW2A0A1B0GU75 182 aa17.5■□□□□ 0.39
USB1-213ENST00000566292 HYKKA2RU49 373 aa17.5■□□□□ 0.39
USB1-213ENST00000566292 SDR42E2A6NKP2 422 aa17.5■□□□□ 0.39
USB1-213ENST00000566292 VSTM2BA6NLU5 285 aa17.5■□□□□ 0.39
USB1-213ENST00000566292 TCP11X1B4DZS4 312 aa17.5■□□□□ 0.39
USB1-213ENST00000566292 E5RI56 91 aa17.5■□□□□ 0.39
USB1-213ENST00000566292 MYO1CO00159 1063 aa17.5■□□□□ 0.39
USB1-213ENST00000566292 USP1O94782 785 aa17.5■□□□□ 0.39
USB1-213ENST00000566292 ALPPP05187 535 aa17.5■□□□□ 0.39
USB1-213ENST00000566292 GP1BBP13224 206 aa17.5■□□□□ 0.39
USB1-213ENST00000566292 COILP38432 576 aaPredicted RBP17.5■□□□□ 0.39
USB1-213ENST00000566292 CTBP1Q13363 440 aa17.5■□□□□ 0.39
USB1-213ENST00000566292 CYP1B1Q16678 543 aa17.5■□□□□ 0.39
USB1-213ENST00000566292 FBXO42Q6P3S6 717 aa17.5■□□□□ 0.39
USB1-213ENST00000566292 ZNF549Q6P9A3 640 aa17.5■□□□□ 0.39
USB1-213ENST00000566292 KIRREL2Q6UWL6 708 aa17.5■□□□□ 0.39
USB1-213ENST00000566292 INPP5DQ92835 1189 aa17.5■□□□□ 0.39
USB1-213ENST00000566292 C19orf60Q96EN9 201 aa17.5■□□□□ 0.39
USB1-213ENST00000566292 PBKQ96KB5 322 aa17.5■□□□□ 0.39
USB1-213ENST00000566292 PKP4Q99569 1192 aa17.5■□□□□ 0.39
USB1-213ENST00000566292 DPH7Q9BTV6 452 aa17.5■□□□□ 0.39
USB1-213ENST00000566292 XAB2Q9HCS7 855 aaKnown RBP17.5■□□□□ 0.39
USB1-213ENST00000566292 FBXO6Q9NRD1 293 aaPredicted RBP17.5■□□□□ 0.39
USB1-213ENST00000566292 JRKLQ9Y4A0 524 aa17.5■□□□□ 0.39
USB1-213ENST00000566292 CNTRLQ7Z7A1 2325 aa17.5■□□□□ 0.39
USB1-213ENST00000566292 IGKV1-8A0A0C4DH67 115 aa17.49■□□□□ 0.39
USB1-213ENST00000566292 MAGEB16A2A368 324 aa17.49■□□□□ 0.39
USB1-213ENST00000566292 EIF2S1P05198 315 aaKnown RBP17.49■□□□□ 0.39
USB1-213ENST00000566292 ITGA3P26006 1051 aa17.49■□□□□ 0.39
USB1-213ENST00000566292 CMPK1P30085 196 aa17.49■□□□□ 0.39
USB1-213ENST00000566292 MAGEA3P43357 314 aa17.49■□□□□ 0.39
USB1-213ENST00000566292 AIMP2Q13155 320 aaKnown RBP17.49■□□□□ 0.39
USB1-213ENST00000566292 MRPL49Q13405 166 aaKnown RBP17.49■□□□□ 0.39
USB1-213ENST00000566292 FHL5Q5TD97 284 aa17.49■□□□□ 0.39
USB1-213ENST00000566292 CCDC137Q6PK04 289 aaKnown RBP17.49■□□□□ 0.39
USB1-213ENST00000566292 REXO1L1PQ8IX06 675 aa17.49■□□□□ 0.39
USB1-213ENST00000566292 SMPDL3AQ92484 453 aa17.49■□□□□ 0.39
USB1-213ENST00000566292 SNRNP40Q96DI7 357 aaKnown RBP17.49■□□□□ 0.39
USB1-213ENST00000566292 C10orf90Q96M02 699 aa17.49■□□□□ 0.39
USB1-213ENST00000566292 ZFYVE21Q9BQ24 234 aa17.49■□□□□ 0.39
USB1-213ENST00000566292 MESP1Q9BRJ9 268 aa17.49■□□□□ 0.39
USB1-213ENST00000566292 MAP10Q9P2G4 905 aa17.49■□□□□ 0.39
USB1-213ENST00000566292 NXT1Q9UKK6 140 aaKnown RBP17.49■□□□□ 0.39
USB1-213ENST00000566292 B3GNT3Q9Y2A9 372 aa17.49■□□□□ 0.39
USB1-213ENST00000566292 VPS9D1Q9Y2B5 631 aa17.49■□□□□ 0.39
USB1-213ENST00000566292 CTAGE9A4FU28 777 aa17.48■□□□□ 0.39
USB1-213ENST00000566292 H0YGG7 62 aa17.48■□□□□ 0.39
USB1-213ENST00000566292 KIF5CO60282 957 aa17.48■□□□□ 0.39
USB1-213ENST00000566292 KLHL41O60662 606 aa17.48■□□□□ 0.39
USB1-213ENST00000566292 SEMA7AO75326 666 aa17.48■□□□□ 0.39
USB1-213ENST00000566292 IPO13O94829 963 aaKnown RBP17.48■□□□□ 0.39
USB1-213ENST00000566292 CATP04040 527 aaKnown RBP17.48■□□□□ 0.39
USB1-213ENST00000566292 SLC1A2P43004 574 aa17.48■□□□□ 0.39
USB1-213ENST00000566292 PNLIPRP1P54315 467 aa17.48■□□□□ 0.39
USB1-213ENST00000566292 ARF3P61204 181 aaPredicted RBP17.48■□□□□ 0.39
USB1-213ENST00000566292 CUL1Q13616 776 aa17.48■□□□□ 0.39
USB1-213ENST00000566292 THOC5Q13769 683 aaKnown RBP17.48■□□□□ 0.39
USB1-213ENST00000566292 ARHGAP19Q14CB8 494 aa17.48■□□□□ 0.39
USB1-213ENST00000566292 PRTGQ2VWP7 1150 aa17.48■□□□□ 0.39
USB1-213ENST00000566292 PRAMEF13Q5VWM6 474 aa17.48■□□□□ 0.39
USB1-213ENST00000566292 NEK10Q6ZWH5 1172 aa17.48■□□□□ 0.39
USB1-213ENST00000566292 PAQR7Q86WK9 346 aa17.48■□□□□ 0.39
USB1-213ENST00000566292 IQCKQ8N0W5 287 aa17.48■□□□□ 0.39
USB1-213ENST00000566292 PPFIBP2Q8ND30 876 aa17.48■□□□□ 0.39
USB1-213ENST00000566292 SIGLEC10Q96LC7 697 aa17.48■□□□□ 0.39
USB1-213ENST00000566292 PLCD4Q9BRC7 762 aa17.48■□□□□ 0.39
USB1-213ENST00000566292 ZNF304Q9HCX3 659 aa17.48■□□□□ 0.39
USB1-213ENST00000566292 MRPS30Q9NP92 439 aaKnown RBP17.48■□□□□ 0.39
USB1-213ENST00000566292 FAM114A2Q9NRY5 505 aa17.48■□□□□ 0.39
USB1-213ENST00000566292 NRDCO43847 1150 aa17.47■□□□□ 0.39
USB1-213ENST00000566292 AGFG2O95081 481 aa17.47■□□□□ 0.39
USB1-213ENST00000566292 SLC16A8O95907 504 aa17.47■□□□□ 0.39
USB1-213ENST00000566292 VARSP26640 1264 aaKnown RBP17.47■□□□□ 0.39
USB1-213ENST00000566292 RPA3P35244 121 aaPredicted RBP17.47■□□□□ 0.39
USB1-213ENST00000566292 KLC1Q07866 573 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms