RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 SLC8A3P57103 927 aa4□□□□□ -1.77
UBR1-205ENST00000564540 UBXN2AP68543 259 aa4□□□□□ -1.77
UBR1-205ENST00000564540 CALCOCO2Q13137 446 aa4□□□□□ -1.77
UBR1-205ENST00000564540 VEZF1Q14119 521 aa4□□□□□ -1.77
UBR1-205ENST00000564540 MAPRE1Q15691 268 aaKnown RBP4□□□□□ -1.77
UBR1-205ENST00000564540 ZNF74Q16587 644 aa4□□□□□ -1.77
UBR1-205ENST00000564540 BMP2KLQ5H9B9 411 aa4□□□□□ -1.77
UBR1-205ENST00000564540 LYSMD4Q5XG99 296 aa4□□□□□ -1.77
UBR1-205ENST00000564540 LMNTD2Q8IXW0 634 aa4□□□□□ -1.77
UBR1-205ENST00000564540 AMER3Q8N944 861 aa4□□□□□ -1.77
UBR1-205ENST00000564540 Q8NBF4 154 aa4□□□□□ -1.77
UBR1-205ENST00000564540 TEKT4Q8WW24 435 aa4□□□□□ -1.77
UBR1-205ENST00000564540 NKX3-1Q99801 234 aaPredicted RBP4□□□□□ -1.77
UBR1-205ENST00000564540 GPATCH1Q9BRR8 931 aaKnown RBP4□□□□□ -1.77
UBR1-205ENST00000564540 MAF1Q9H063 256 aa4□□□□□ -1.77
UBR1-205ENST00000564540 FAM49AQ9H0Q0 323 aaPredicted RBP4□□□□□ -1.77
UBR1-205ENST00000564540 ANKZF1Q9H8Y5 726 aa4□□□□□ -1.77
UBR1-205ENST00000564540 C19orf25Q9UFG5 118 aaPredicted RBP4□□□□□ -1.77
UBR1-205ENST00000564540 SLC24A2Q9UI40 661 aa4□□□□□ -1.77
UBR1-205ENST00000564540 WDR83OSQ9Y284 106 aa4□□□□□ -1.77
UBR1-205ENST00000564540 CSNK1G3Q9Y6M4 447 aa4□□□□□ -1.77
UBR1-205ENST00000564540 ZHX2Q9Y6X8 837 aa4□□□□□ -1.77
UBR1-205ENST00000564540 R4GN57 208 aa4□□□□□ -1.77
UBR1-205ENST00000564540 hCG_1809904A0A1W2PP81 198 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 A0A1W2PPE2 198 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 A0A1W2PR64 198 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 MPTX1A8MV57 137 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 C22orf31O95567 290 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 IGHEP01854 428 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 CAPN2P17655 700 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 CD27P26842 260 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 RBMS1P29558 406 aaKnown RBP3.99□□□□□ -1.77
UBR1-205ENST00000564540 TLX1P31314 330 aaPredicted RBP3.99□□□□□ -1.77
UBR1-205ENST00000564540 CSRP3P50461 194 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 XGP55808 180 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 CYCSP99999 105 aaKnown RBP3.99□□□□□ -1.77
UBR1-205ENST00000564540 MS4A2Q01362 244 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 ELAVL2Q12926 359 aaKnown RBP3.99□□□□□ -1.77
UBR1-205ENST00000564540 RAPSNQ13702 412 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 FASTKD3Q14CZ7 662 aaKnown RBP3.99□□□□□ -1.77
UBR1-205ENST00000564540 EFTUD2Q15029 972 aaKnown RBP eCLIP3.99□□□□□ -1.77
UBR1-205ENST00000564540 MOGAT2Q3SYC2 334 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 PRR27Q6MZM9 219 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 CAMKMTQ7Z624 323 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 CATSPERDQ86XM0 798 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 KLHDC1Q8N7A1 406 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 AQP11Q8NBQ7 271 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 SLC37A3Q8NCC5 494 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 TSPAN14Q8NG11 270 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 OR10Q1Q8NGQ4 319 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 FAM71F1Q96KD3 344 aaPredicted RBP3.99□□□□□ -1.77
UBR1-205ENST00000564540 C4orf45Q96LM5 186 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 PRICKLE1Q96MT3 831 aaPredicted RBP3.99□□□□□ -1.77
UBR1-205ENST00000564540 APOL6Q9BWW8 343 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 NOL11Q9H8H0 719 aaKnown RBP3.99□□□□□ -1.77
UBR1-205ENST00000564540 Q9H8V8 135 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 CHST11Q9NPF2 352 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 DDX25Q9UHL0 483 aaKnown RBP3.99□□□□□ -1.77
UBR1-205ENST00000564540 CSAG2Q9Y5P2 127 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 RPS6KL1Q9Y6S9 549 aa3.99□□□□□ -1.77
UBR1-205ENST00000564540 IGHV3OR16-10A0A075B7F0 116 aa3.98□□□□□ -1.77
UBR1-205ENST00000564540 PI4K2BG5E9Z4 385 aa3.98□□□□□ -1.77
UBR1-205ENST00000564540 ERAL1O75616 437 aaKnown RBP3.98□□□□□ -1.77
UBR1-205ENST00000564540 ABCB1P08183 1280 aaPredicted RBP3.98□□□□□ -1.77
UBR1-205ENST00000564540 CYP11B2P19099 503 aa3.98□□□□□ -1.77
UBR1-205ENST00000564540 NOVP48745 357 aa3.98□□□□□ -1.77
UBR1-205ENST00000564540 LMAN1P49257 510 aa3.98□□□□□ -1.77
UBR1-205ENST00000564540 COX10Q12887 443 aa3.98□□□□□ -1.77
UBR1-205ENST00000564540 ITGA7Q13683 1181 aa3.98□□□□□ -1.77
UBR1-205ENST00000564540 PHKG1Q16816 387 aa3.98□□□□□ -1.77
UBR1-205ENST00000564540 GARNL3Q5VVW2 1013 aa3.98□□□□□ -1.77
UBR1-205ENST00000564540 KIF6Q6ZMV9 814 aa3.98□□□□□ -1.77
UBR1-205ENST00000564540 Q8N377 158 aa3.98□□□□□ -1.77
UBR1-205ENST00000564540 NUP37Q8NFH4 326 aa3.98□□□□□ -1.77
UBR1-205ENST00000564540 OR4K1Q8NGD4 311 aa3.98□□□□□ -1.77
UBR1-205ENST00000564540 C11orf45Q8TAV5 145 aa3.98□□□□□ -1.77
UBR1-205ENST00000564540 MIPOL1Q8TD10 442 aa3.98□□□□□ -1.77
UBR1-205ENST00000564540 SPAG5Q96R06 1193 aa3.98□□□□□ -1.77
UBR1-205ENST00000564540 GPR88Q9GZN0 384 aa3.98□□□□□ -1.77
UBR1-205ENST00000564540 CNOT10Q9H9A5 744 aaKnown RBP3.98□□□□□ -1.77
UBR1-205ENST00000564540 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.98□□□□□ -1.77
UBR1-205ENST00000564540 TEX10Q9NXF1 929 aaPredicted RBP3.98□□□□□ -1.77
UBR1-205ENST00000564540 MUTYHQ9UIF7 546 aa3.98□□□□□ -1.77
UBR1-205ENST00000564540 MAN1B1Q9UKM7 699 aa3.98□□□□□ -1.77
UBR1-205ENST00000564540 SPRY1O43609 319 aaPredicted RBP3.97□□□□□ -1.77
UBR1-205ENST00000564540 ACSL3O95573 720 aa3.97□□□□□ -1.77
UBR1-205ENST00000564540 IRF2P14316 349 aa3.97□□□□□ -1.77
UBR1-205ENST00000564540 NNMTP40261 264 aa3.97□□□□□ -1.77
UBR1-205ENST00000564540 LHX1P48742 406 aa3.97□□□□□ -1.77
UBR1-205ENST00000564540 KLC1Q07866 573 aa3.97□□□□□ -1.77
UBR1-205ENST00000564540 PRKG2Q13237 762 aa3.97□□□□□ -1.77
UBR1-205ENST00000564540 LY6DQ14210 128 aa3.97□□□□□ -1.77
UBR1-205ENST00000564540 LETM2Q2VYF4 491 aa3.97□□□□□ -1.77
UBR1-205ENST00000564540 CES4AQ5XG92 561 aa3.97□□□□□ -1.77
UBR1-205ENST00000564540 LEKR1Q6ZMV7 388 aa3.97□□□□□ -1.77
UBR1-205ENST00000564540 TC2NQ8N9U0 490 aa3.97□□□□□ -1.77
UBR1-205ENST00000564540 ATL1Q8WXF7 558 aa3.97□□□□□ -1.77
UBR1-205ENST00000564540 LPAR4Q99677 370 aa3.97□□□□□ -1.77
UBR1-205ENST00000564540 SOSTQ9BQB4 213 aa3.97□□□□□ -1.77
UBR1-205ENST00000564540 ZMYND12Q9H0C1 365 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms