RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 ARHGAP19Q14CB8 494 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 TCTE1Q5JU00 501 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 RBM20Q5T481 1227 aaKnown RBP19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 HIBCHQ6NVY1 386 aaPredicted RBP19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 MRPL14Q6P1L8 145 aaKnown RBP19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 CYHR1Q6ZMK1 362 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 RNF44Q7L0R7 432 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 OR4N4Q8N0Y3 316 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 METTL27Q8N6F8 245 aaPredicted RBP19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 TTC29Q8NA56 475 aaPredicted RBP19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 OR2Y1Q8NGV0 311 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 ZNF480Q8WV37 535 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 CERS2Q96G23 380 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 RUNDC3BQ96NL0 473 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 NAT9Q9BTE0 207 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 SLC25A23Q9BV35 468 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 TRIM31Q9BZY9 425 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 MRPS30Q9NP92 439 aaKnown RBP19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 ABCF3Q9NUQ8 709 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 TAC3Q9UHF0 121 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 TRMT6Q9UJA5 497 aaKnown RBP19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 IGKV1-8A0A0C4DH67 115 aa19.11■□□□□ 0.65
SHCBP1-203ENST00000564272 FITM1A5D6W6 292 aa19.11■□□□□ 0.65
SHCBP1-203ENST00000564272 GFYI3L273 518 aa19.11■□□□□ 0.65
SHCBP1-203ENST00000564272 DSCR3O14972 297 aa19.11■□□□□ 0.65
SHCBP1-203ENST00000564272 MED26O95402 600 aa19.11■□□□□ 0.65
SHCBP1-203ENST00000564272 PAFAH1B1P43034 410 aa19.11■□□□□ 0.65
SHCBP1-203ENST00000564272 CARSP49589 748 aaKnown RBP19.11■□□□□ 0.65
SHCBP1-203ENST00000564272 PGDP52209 483 aa19.11■□□□□ 0.65
SHCBP1-203ENST00000564272 WASHC2DQ5SRD0 308 aa19.11■□□□□ 0.65
SHCBP1-203ENST00000564272 YOD1Q5VVQ6 348 aaPredicted RBP19.11■□□□□ 0.65
SHCBP1-203ENST00000564272 UBE2R2Q712K3 238 aaPredicted RBP19.11■□□□□ 0.65
SHCBP1-203ENST00000564272 COX15Q7KZN9 410 aa19.11■□□□□ 0.65
SHCBP1-203ENST00000564272 CNTN4Q8IWV2 1026 aa19.11■□□□□ 0.65
SHCBP1-203ENST00000564272 PDIK1LQ8N165 341 aa19.11■□□□□ 0.65
SHCBP1-203ENST00000564272 FBXO15Q8NCQ5 510 aaPredicted RBP19.11■□□□□ 0.65
SHCBP1-203ENST00000564272 CLMPQ9H6B4 373 aa19.11■□□□□ 0.65
SHCBP1-203ENST00000564272 SYNPO2LQ9H987 977 aa19.11■□□□□ 0.65
SHCBP1-203ENST00000564272 ENAMQ9NRM1 1142 aa19.11■□□□□ 0.65
SHCBP1-203ENST00000564272 ZC3H7BQ9UGR2 993 aaKnown RBP19.11■□□□□ 0.65
SHCBP1-203ENST00000564272 A6NL46 340 aa19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 CCDC188H7C350 402 aa19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 SEC31AO94979 1220 aaKnown RBP19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 UMODP07911 640 aa19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 HSD17B2P37059 387 aa19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 CSRP3P50461 194 aa19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 CDKN2DP55273 166 aa19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 KCNC4Q03721 635 aa19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 SSPNQ14714 243 aa19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 NAA25Q14CX7 972 aa19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 HIF1AQ16665 826 aa19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 ICE2Q659A1 982 aa19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 TRMT10BQ6PF06 316 aaKnown RBP19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 MED25Q71SY5 747 aa19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 PAQR7Q86WK9 346 aa19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 TEX19Q8NA77 164 aa19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 GABPB2Q8TAK5 448 aaPredicted RBP19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 KRT12Q99456 494 aa19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 ZFYVE21Q9BQ24 234 aa19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 PLCD4Q9BRC7 762 aa19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 PPANQ9NQ55 473 aaKnown RBP19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 STOX2Q9P2F5 926 aaPredicted RBP19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 ADAMTS6Q9UKP5 1117 aa19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 PCDHGA9Q9Y5G4 932 aaKnown RBP19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 MYO18BQ8IUG5 2567 aa19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 PCM1Q15154 2024 aa19.1■□□□□ 0.65
SHCBP1-203ENST00000564272 ZNF839A8K0R7 811 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 E7ENX8 843 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 SMAPO00193 183 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 EIF3FO00303 357 aaPredicted RBP19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 TP73O15350 636 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 ZBTB14O43829 449 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 SRPX2O60687 465 aaPredicted RBP19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 CEACAM4O75871 244 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 AHSGP02765 367 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 EIF2S1P05198 315 aaKnown RBP19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 IMPA1P29218 277 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 SKIV2L2P42285 1042 aaKnown RBP19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 OR1D4P47884 311 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 RRADP55042 308 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 MRPS25P82663 173 aaKnown RBP19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 TAP2Q03519 686 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 STEAP4Q687X5 459 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 UGT3A1Q6NUS8 523 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 FBXO42Q6P3S6 717 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 KIAA0408Q6ZU52 694 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 PPP1R32Q7Z5V6 425 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 ANKMY2Q8IV38 441 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 LRRC56Q8IYG6 542 aaPredicted RBP19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 C17orf53Q8N3J3 647 aaPredicted RBP19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 TMEM102Q8N9M5 508 aaPredicted RBP19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 FDCSPQ8NFU4 85 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 EEF1AKMT1Q8WVE0 214 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 FKBP10Q96AY3 582 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 SNF8Q96H20 258 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 MLXIPLQ9NP71 852 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 TAS2R13Q9NYV9 303 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 ANKMY1Q9P2S6 941 aa19.09■□□□□ 0.65
SHCBP1-203ENST00000564272 CTSFQ9UBX1 484 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms