RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 TM9SF3Q9HD45 589 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 IL37Q9NZH6 218 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 VAPAQ9P0L0 249 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 INTS6Q9UL03 887 aaKnown RBP12.3□□□□□ -0.44
COMMD4-209ENST00000564068 FZD4Q9ULV1 537 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 KIAA0513O60268 411 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 TBL1XO60907 577 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 IGSF6O95976 241 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 CLTBP09497 229 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 HTR7P34969 479 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 CLK3P49761 638 aaKnown RBP12.3□□□□□ -0.44
COMMD4-209ENST00000564068 SOX4Q06945 474 aaPredicted RBP12.3□□□□□ -0.44
COMMD4-209ENST00000564068 DUSP4Q13115 394 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 FBXO43Q4G163 708 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 ZFAND4Q86XD8 727 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 FUNDC1Q8IVP5 155 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 CCDC28AQ8IWP9 274 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 FAM217AQ8IXS0 508 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 SLC38A2Q96QD8 506 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 BBS4Q96RK4 519 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 PKP4Q99569 1192 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 DUSP26Q9BV47 211 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 C2orf49Q9BVC5 232 aaPredicted RBP12.3□□□□□ -0.44
COMMD4-209ENST00000564068 OSBPL10Q9BXB5 764 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 ATP13A3Q9H7F0 1226 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 GPN2Q9H9Y4 310 aaPredicted RBP12.3□□□□□ -0.44
COMMD4-209ENST00000564068 MCUBQ9NWR8 336 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 RBPJLQ9UBG7 517 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 B3GNT3Q9Y2A9 372 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 BOLA1Q9Y3E2 137 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 GLYATL1P3A0A0U1RQE8 302 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 PGRMC2O15173 223 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 STX11O75558 287 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 UPK1BO75841 260 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 SOX14O95416 240 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 MATN4O95460 622 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 BMP4P12644 408 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 GGT1P19440 569 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 ABRAXAS2Q15018 415 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 TAF1AQ15573 450 aaPredicted RBP12.29□□□□□ -0.44
COMMD4-209ENST00000564068 RFTN2Q52LD8 501 aaPredicted RBP12.29□□□□□ -0.44
COMMD4-209ENST00000564068 ALFQ53S48 1182 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 DCST1Q5T197 706 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 GCNT6Q5T4J0 391 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 RANBP10Q6VN20 620 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 GHDCQ8N2G8 530 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 OR8J3Q8NGG0 315 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 KAT2AQ92830 837 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 TP53INP1Q96A56 240 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 TSGA13Q96PP4 275 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 ZDHHC6Q9H6R6 413 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 BRD9Q9H8M2 597 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 MS4A12Q9NXJ0 267 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 IFT52Q9Y366 437 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 PCDHB7Q9Y5E2 793 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 MYL9P24844 172 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 IDUAP35475 653 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 GABARAPL2P60520 117 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 C2orf80Q0P641 193 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 NPRL3Q12980 569 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 TUSC3Q13454 348 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 HECTD3Q5T447 861 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 ZNF648Q5T619 568 aaPredicted RBP12.29□□□□□ -0.44
COMMD4-209ENST00000564068 DCP2Q8IU60 420 aaKnown RBP12.29□□□□□ -0.44
COMMD4-209ENST00000564068 CLP1Q92989 425 aaKnown RBP12.29□□□□□ -0.44
COMMD4-209ENST00000564068 C12orf4Q9NQ89 552 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 RHCGQ9UBD6 479 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 SEC14L3Q9UDX4 400 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 PCDHGB6Q9Y5F9 930 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 DNMT3AQ9Y6K1 912 aaPredicted RBP12.29□□□□□ -0.44
COMMD4-209ENST00000564068 ARL5CA6NH57 179 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 NT5C1B-RDH14C9J2C7 533 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 SLC28A2O43868 658 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 ADAM23O75077 832 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 HTR2BP41595 481 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 ANXA11P50995 505 aaKnown RBP12.29□□□□□ -0.44
COMMD4-209ENST00000564068 MRPS6P82932 125 aaKnown RBP12.29□□□□□ -0.44
COMMD4-209ENST00000564068 SRSF11Q05519 484 aaKnown RBP12.29□□□□□ -0.44
COMMD4-209ENST00000564068 ARHGAP1Q07960 439 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 E2F2Q14209 437 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 SUZ12Q15022 739 aaKnown RBP12.29□□□□□ -0.44
COMMD4-209ENST00000564068 ATXN7L2Q5T6C5 722 aaPredicted RBP12.29□□□□□ -0.44
COMMD4-209ENST00000564068 SMYD5Q6GMV2 418 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 RASSF6Q6ZTQ3 369 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 TMPRSS11BQ86T26 416 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 TRAPPC5Q8IUR0 188 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 TIGD4Q8IY51 512 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 RGL4Q8IZJ4 473 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 MGLLQ99685 303 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 DPH2Q9BQC3 489 aaPredicted RBP12.29□□□□□ -0.44
COMMD4-209ENST00000564068 EMILIN2Q9BXX0 1053 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 TXNRD2Q9NNW7 524 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 SEMA3GQ9NS98 782 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 KCTD5Q9NXV2 234 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 PCDH10Q9P2E7 1040 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 COL1A2P08123 1366 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 UBR2Q8IWV8 1755 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 TJP1Q07157 1748 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 GSAPA4D1B5 854 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 SGTAO43765 313 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms