RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 SCRG1O75711 98 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 SLC35E2BP0CK96 405 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 CCDC166P0CW27 439 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 LIFP15018 202 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 CD1DP15813 335 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 STMN1P16949 149 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 CYP2A7P20853 494 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 GCAP28676 217 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 PHBP35232 272 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 RPA3P35244 121 aaPredicted RBP8.2□□□□□ -1.1
UBR1-204ENST00000563239 RORAP35398 523 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 STAT5AP42229 794 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 KCNC1P48547 511 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 ITGA1P56199 1179 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 RAB10P61026 200 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 TBPL1P62380 186 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 PRDX1Q06830 199 aaKnown RBP8.2□□□□□ -1.1
UBR1-204ENST00000563239 ABHD18Q0P651 414 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 GPS2Q13227 327 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 BMPR2Q13873 1038 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 SLMAPQ14BN4 828 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 OR4D1Q15615 310 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 TSNQ15631 228 aaKnown RBP8.2□□□□□ -1.1
UBR1-204ENST00000563239 TEX35Q5T0J7 233 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 ICE2Q659A1 982 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 ZNF385CQ66K41 422 aaPredicted RBP8.2□□□□□ -1.1
UBR1-204ENST00000563239 FRMPD2BQ6IN97 320 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 AGTRAPQ6RW13 159 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 C6orf15Q6UXA7 325 aaPredicted RBP8.2□□□□□ -1.1
UBR1-204ENST00000563239 ZNF517Q6ZMY9 492 aaPredicted RBP8.2□□□□□ -1.1
UBR1-204ENST00000563239 PAQR7Q86WK9 346 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 SYTL1Q8IYJ3 562 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 EIF1ADQ8N9N8 165 aaKnown RBP8.2□□□□□ -1.1
UBR1-204ENST00000563239 OR56A3Q8NH54 315 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 UHMK1Q8TAS1 419 aaKnown RBP8.2□□□□□ -1.1
UBR1-204ENST00000563239 SLC44A1Q8WWI5 657 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 PTERQ96BW5 349 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 FBXL8Q96CD0 374 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 MRRFQ96E11 262 aaKnown RBP8.2□□□□□ -1.1
UBR1-204ENST00000563239 OR4K3Q96R72 315 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 DPH7Q9BTV6 452 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 DHRS4Q9BTZ2 278 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 SGPP1Q9BX95 441 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 UNKQ9C0B0 810 aaKnown RBP8.2□□□□□ -1.1
UBR1-204ENST00000563239 DERL2Q9GZP9 239 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 ATG10Q9H0Y0 220 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 GPAMQ9HCL2 828 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 PCMTD2Q9NV79 361 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 CUEDC1Q9NWM3 386 aaPredicted RBP8.2□□□□□ -1.1
UBR1-204ENST00000563239 EURLQ9NYK6 297 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.2□□□□□ -1.1
UBR1-204ENST00000563239 TXNDC16Q9P2K2 825 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 IL17BQ9UHF5 180 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 PLCL2Q9UPR0 1127 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 PCDHB3Q9Y5E6 796 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 USP9XQ93008 2570 aaPredicted RBP8.19□□□□□ -1.1
UBR1-204ENST00000563239 LOC105369274A0A096LPK9 316 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 LOC102723532A0A0G2JNH3 316 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 ZNF839A8K0R7 811 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 CYSRT1A8MQ03 144 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 K7ENP7 123 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 RIPK2O43353 540 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 ZNF749O43361 778 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 KALRNO60229 2985 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 MED26O95402 600 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 GUCA1CO95843 209 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 ALDOAP04075 364 aaKnown RBP8.19□□□□□ -1.1
UBR1-204ENST00000563239 CAPN1P07384 714 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 ABHD2P08910 425 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 ENO2P09104 434 aaPredicted RBP8.19□□□□□ -1.1
UBR1-204ENST00000563239 SPTBP11277 2137 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 NPPBP16860 134 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 TNFRSF8P28908 595 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 CMPK1P30085 196 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 MAGEA12P43365 314 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 ATP1A2P50993 1020 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 PMS2P54278 862 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 SLC12A2P55011 1212 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 AP1S2P56377 157 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 CDKL1Q00532 357 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 VAC14Q08AM6 782 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 NAE1Q13564 534 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 C18orf21Q32NC0 220 aaPredicted RBP8.19□□□□□ -1.1
UBR1-204ENST00000563239 MANEAQ5SRI9 462 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 MROH9Q5TGP6 573 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 CYB5D1Q6P9G0 228 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 FAM199XQ6PEV8 388 aaPredicted RBP8.19□□□□□ -1.1
UBR1-204ENST00000563239 INO80CQ6PI98 192 aaPredicted RBP8.19□□□□□ -1.1
UBR1-204ENST00000563239 RNF44Q7L0R7 432 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 TRMT10CQ7L0Y3 403 aaKnown RBP8.19□□□□□ -1.1
UBR1-204ENST00000563239 TMEM126BQ8IUX1 230 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 DSELQ8IZU8 1212 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 CENPLQ8N0S6 344 aaPredicted RBP8.19□□□□□ -1.1
UBR1-204ENST00000563239 OR4N4Q8N0Y3 316 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 ESX1Q8N693 406 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 CT55Q8WUE5 264 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 DCAKDQ8WVC6 231 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 ISL2Q96A47 359 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 PYCR2Q96C36 320 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 TSPAN17Q96FV3 270 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms