RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 SGK2Q9HBY8 427 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 SPATA6Q9NWH7 488 aaPredicted RBP18.51■□□□□ 0.55
SMPD3-203ENST00000563226 SLC23A2Q9UGH3 650 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 TMED5Q9Y3A6 229 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 TRBV5-3A0A0A0MS03 114 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 H0YIV9 168 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 DENRO43583 198 aaKnown RBP18.5■□□□□ 0.55
SMPD3-203ENST00000563226 PCDH8O95206 1070 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 ACADLP28330 430 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 CYP4F3Q08477 520 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 STARD3Q14849 445 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 CATSPEREQ5SY80 951 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 GLYATQ6IB77 296 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 UGT2A3Q6UWM9 527 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 ADAMTSL4Q6UY14 1074 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 TMPRSS11BQ86T26 416 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 ZNF513Q8N8E2 541 aaPredicted RBP18.5■□□□□ 0.55
SMPD3-203ENST00000563226 HM13Q8TCT9 377 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 BIRC7Q96CA5 298 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 ZNF514Q96K75 400 aaPredicted RBP18.5■□□□□ 0.55
SMPD3-203ENST00000563226 INPP5KQ9BT40 448 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 ZDHHC5Q9C0B5 715 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 AGPAT4Q9NRZ5 378 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 TM7SF3Q9NS93 570 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 UBAP1Q9NZ09 502 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 CNOT11Q9UKZ1 510 aaKnown RBP18.5■□□□□ 0.55
SMPD3-203ENST00000563226 RAB26Q9ULW5 256 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 GPR34Q9UPC5 381 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 NUMA1Q14980 2115 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 C17orf113A0A1B0GUU1 675 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 A0A1W2PP55 124 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 MGAT4DA6NG13 374 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 MAGEB17A8MXT2 336 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 HNRNPRO43390 633 aaKnown RBP18.5■□□□□ 0.55
SMPD3-203ENST00000563226 GPIP06744 558 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 IL10P22301 178 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 MAPK1P28482 360 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 S100A3P33764 101 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 TIE1P35590 1138 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 HNF4AP41235 474 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 PRKCQQ04759 706 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 RAB30Q15771 203 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 PGS1Q32NB8 556 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 RUNDC3AQ59EK9 446 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 SLCO4C1Q6ZQN7 724 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 EPHX4Q8IUS5 362 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 PHACTR4Q8IZ21 702 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 MARVELD2Q8N4S9 558 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 ANKFN1Q8N957 763 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 PHC3Q8NDX5 983 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 OR9A1PQ8NGU1 263 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 OR10A6Q8NH74 314 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 AURKBQ96GD4 344 aaPredicted RBP18.5■□□□□ 0.55
SMPD3-203ENST00000563226 THUMPD3Q9BV44 507 aaKnown RBP18.5■□□□□ 0.55
SMPD3-203ENST00000563226 TRMT61BQ9BVS5 477 aaKnown RBP18.5■□□□□ 0.55
SMPD3-203ENST00000563226 OR52A5Q9H2C5 316 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 MBNL1Q9NR56 388 aaKnown RBP18.5■□□□□ 0.55
SMPD3-203ENST00000563226 GPRC5BQ9NZH0 403 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 VPS29Q9UBQ0 182 aa18.5■□□□□ 0.55
SMPD3-203ENST00000563226 SAC3D1A6NKF1 404 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 SOCS2O14508 198 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 MT-ND1P03886 318 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 GSNP06396 782 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 BMP2P12643 396 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 NPPBP16860 134 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 CDKN2CP42773 168 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 GALK1P51570 392 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 CDK3Q00526 305 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 PCDH1Q08174 1060 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 CAMK2GQ13555 558 aaPredicted RBP18.49■□□□□ 0.55
SMPD3-203ENST00000563226 ISLR2Q6UXK2 745 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 PROSER1Q86XN7 944 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 LRRC56Q8IYG6 542 aaPredicted RBP18.49■□□□□ 0.55
SMPD3-203ENST00000563226 C10orf111Q8N326 155 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 HDDC3Q8N4P3 179 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 TRPV3Q8NET8 790 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 OR7G3Q8NG95 312 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 IL17FQ96PD4 163 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 HHIPQ96QV1 700 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 NRTNQ99748 197 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 S1PR5Q9H228 398 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 VCXQ9H320 206 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 CXorf56Q9H5V9 222 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 ANAPC2Q9UJX6 822 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 PLAGL1Q9UM63 463 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 PCDHB14Q9Y5E9 798 aa18.49■□□□□ 0.55
SMPD3-203ENST00000563226 KANSL1LA0AUZ9 987 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 K7EQS6 105 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 LINGO3P0C6S8 592 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 PCNAP12004 261 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 HOXB9P17482 250 aaPredicted RBP18.48■□□□□ 0.55
SMPD3-203ENST00000563226 AASDHQ4L235 1098 aaPredicted RBP18.48■□□□□ 0.55
SMPD3-203ENST00000563226 OR4F3Q6IEY1 312 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 CAPN13Q6MZZ7 669 aaPredicted RBP18.48■□□□□ 0.55
SMPD3-203ENST00000563226 KIAA1211LQ6NV74 962 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 HUS1BQ8NHY5 278 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 KLK6Q92876 244 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 TESCQ96BS2 214 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 ZNF597Q96LX8 424 aa18.48■□□□□ 0.55
SMPD3-203ENST00000563226 CNBD2Q96M20 576 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms