RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 CROCCP2Q86T23 111 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 TRIM73Q86UV7 250 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 IQCHQ86VS3 1027 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 GPSM1Q86YR5 675 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 SYT12Q8IV01 421 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 RASGRP3Q8IV61 690 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 NAGSQ8N159 534 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 SLC25A45Q8N413 288 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 PTGR2Q8N8N7 351 aaPredicted RBP5.06□□□□□ -1.6
SPG11-220ENST00000559933 AGR3Q8TD06 166 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 SLC37A2Q8TED4 501 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 ASZ1Q8WWH4 475 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 PYCR2Q96C36 320 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 THOC1Q96FV9 657 aaKnown RBP5.06□□□□□ -1.6
SPG11-220ENST00000559933 ZNF514Q96K75 400 aaPredicted RBP5.06□□□□□ -1.6
SPG11-220ENST00000559933 CABS1Q96KC9 395 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 TSNARE1Q96NA8 513 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 FERD3LQ96RJ6 166 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 ELF4Q99607 663 aaPredicted RBP5.06□□□□□ -1.6
SPG11-220ENST00000559933 MIPEPQ99797 713 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 FAM126AQ9BYI3 521 aaPredicted RBP5.06□□□□□ -1.6
SPG11-220ENST00000559933 PITPNM3Q9BZ71 974 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 C20orf27Q9GZN8 174 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 MRPL46Q9H2W6 279 aaKnown RBP5.06□□□□□ -1.6
SPG11-220ENST00000559933 GAREM1Q9H706 876 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 RMI1Q9H9A7 625 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 CAPN10Q9HC96 672 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 SYTL2Q9HCH5 934 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 PARD6AQ9NPB6 346 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 NKIRAS1Q9NYS0 192 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 CD274Q9NZQ7 290 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 SENP1Q9P0U3 644 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 ZNF624Q9P2J8 865 aaPredicted RBP5.06□□□□□ -1.6
SPG11-220ENST00000559933 COPG2Q9UBF2 871 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 BTBD3Q9Y2F9 522 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 OARD1Q9Y530 152 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 U3KQE9 123 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 ARHGEF17Q96PE2 2063 aaPredicted RBP5.06□□□□□ -1.6
SPG11-220ENST00000559933 CACNA1EQ15878 2313 aa5.06□□□□□ -1.6
SPG11-220ENST00000559933 PI4KAP42356 2102 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 LY6G6EA0A0G2JKS1 128 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 C17orf113A0A1B0GUU1 675 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 LNP1A1A4G5 178 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 TMEM233B4DJY2 109 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 GPR89AB7ZAQ6 455 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 AGRPO00253 132 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 IFRD1O00458 451 aaPredicted RBP5.05□□□□□ -1.6
SPG11-220ENST00000559933 TRIM38O00635 465 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 UBFD1O14562 309 aaKnown RBP5.05□□□□□ -1.6
SPG11-220ENST00000559933 TOR1BO14657 336 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 TM9SF1O15321 606 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 YY2O15391 372 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 NOBOXO60393 691 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 CCNT2O60583 730 aaKnown RBP5.05□□□□□ -1.6
SPG11-220ENST00000559933 PSIP1O75475 530 aaKnown RBP5.05□□□□□ -1.6
SPG11-220ENST00000559933 ZWINTO95229 277 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 SLC16A8O95907 504 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 CHRNGP07510 517 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 RNASE1P07998 156 aaKnown RBP5.05□□□□□ -1.6
SPG11-220ENST00000559933 GSTA1P08263 222 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 GPR89BP0CG08 455 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 CBSLP0DN79 551 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 COL6A2P12110 1019 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 ENO3P13929 434 aaPredicted RBP5.05□□□□□ -1.6
SPG11-220ENST00000559933 GNSP15586 552 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 VCLP18206 1134 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 CYP2A7P20853 494 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 IDSP22304 550 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 PEBP1P30086 187 aaKnown RBP5.05□□□□□ -1.6
SPG11-220ENST00000559933 CBSP35520 551 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 SKIV2L2P42285 1042 aaKnown RBP5.05□□□□□ -1.6
SPG11-220ENST00000559933 MAPK9P45984 424 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 CCT5P48643 541 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 CDH13P55290 713 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 ATP6V0D1P61421 351 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 TBPL1P62380 186 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 OVGP1Q12889 678 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 GPR18Q14330 331 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 DUOXA1Q1HG43 343 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 TSNAXIP1Q2TAA8 658 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 UAP1L1Q3KQV9 507 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 UNC50Q53HI1 259 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 CAPRIN2Q6IMN6 1127 aaKnown RBP5.05□□□□□ -1.6
SPG11-220ENST00000559933 KLC3Q6P597 504 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 SUSD1Q6UWL2 747 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 FAM47EQ6ZV65 393 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 KANSL1Q7Z3B3 1105 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 GOLGA7Q7Z5G4 137 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 UBE3DQ7Z6J8 389 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 C11orf74Q86VG3 221 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 FBXO39Q8N4B4 442 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 MINDY1Q8N5J2 469 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 CCNYL1Q8N7R7 359 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 LINC01555Q8NAE3 123 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 SUMF1Q8NBK3 374 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 FAM46DQ8NEK8 389 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 OR52E1Q8NGJ3 308 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 OR5K2Q8NHB8 316 aa5.05□□□□□ -1.6
SPG11-220ENST00000559933 TFGQ92734 400 aaPredicted RBP5.05□□□□□ -1.6
SPG11-220ENST00000559933 ATOH1Q92858 354 aaPredicted RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms