RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 LPCAT1Q8NF37 534 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 OR1J2Q8NGS2 313 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 FBXO30Q8TB52 745 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 ZNF606Q8WXB4 792 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 ATL1Q8WXF7 558 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 EGLN2Q96KS0 407 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 LRR1Q96L50 414 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 RUFY1Q96T51 708 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 CACNG6Q9BXT2 260 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 TRIM7Q9C029 511 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 NYXQ9GZU5 481 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 PPIL3Q9H2H8 161 aaKnown RBP3.44□□□□□ -1.86
SPG11-218ENST00000559754 BICC1Q9H694 974 aaKnown RBP3.44□□□□□ -1.86
SPG11-218ENST00000559754 DNAJC18Q9H819 358 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 ZBTB20Q9HC78 741 aaPredicted RBP3.44□□□□□ -1.86
SPG11-218ENST00000559754 DCAF16Q9NXF7 216 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 HMG20BQ9P0W2 317 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 TRPC4Q9UBN4 977 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 FETUBQ9UGM5 382 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 CPSF3Q9UKF6 684 aaKnown RBP3.44□□□□□ -1.86
SPG11-218ENST00000559754 RPH3AQ9Y2J0 694 aaPredicted RBP3.44□□□□□ -1.86
SPG11-218ENST00000559754 JRKLQ9Y4A0 524 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 TRIM17Q9Y577 477 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 A0A1W2PP11 408 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 KANSL1LA0AUZ9 987 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 SYCE3A1L190 88 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 C5orf52A6NGY3 159 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 SDR42E2A6NKP2 422 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 EIF4E1BA6NMX2 242 aaKnown RBP3.43□□□□□ -1.86
SPG11-218ENST00000559754 HHLA1C9JL84 531 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 FAM86B1E9PN63 330 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 H3BQ06 376 aaPredicted RBP3.43□□□□□ -1.86
SPG11-218ENST00000559754 ATP2A1O14983 1001 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 CIDEAO60543 219 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 SMPD2O60906 423 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 ZWINTO95229 277 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 TRIM16O95361 564 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 TBX6O95947 436 aaPredicted RBP3.43□□□□□ -1.86
SPG11-218ENST00000559754 ALPPP05187 535 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 PRSS56P0CW18 603 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 ALPPL2P10696 532 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 ITIH1P19827 911 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 CRKLP46109 303 aaKnown RBP3.43□□□□□ -1.86
SPG11-218ENST00000559754 ZNF75DP51815 510 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 ATXN3P54252 364 aaPredicted RBP3.43□□□□□ -1.86
SPG11-218ENST00000559754 CASP9P55211 416 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 MZT1Q08AG7 82 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 UGCGQ16739 394 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 CDO1Q16878 200 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 PNLIPRP3Q17RR3 467 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 HSP90AA5PQ58FG0 334 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 MDH1BQ5I0G3 518 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 ZC2HC1BQ5TFG8 222 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 TEX38Q6PEX7 206 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 DET1Q7L5Y6 550 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 PIWIL4Q7Z3Z4 852 aaKnown RBP3.43□□□□□ -1.86
SPG11-218ENST00000559754 TRPT1Q86TN4 253 aaKnown RBP3.43□□□□□ -1.86
SPG11-218ENST00000559754 RPAINQ86UA6 219 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 LONP2Q86WA8 852 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 APLFQ8IW19 511 aaPredicted RBP3.43□□□□□ -1.86
SPG11-218ENST00000559754 SFRP1Q8N474 314 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 DBF4BQ8NFT6 615 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.43□□□□□ -1.86
SPG11-218ENST00000559754 SLC13A3Q8WWT9 602 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 TMEM190Q8WZ59 177 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 BCL2L2Q92843 193 aaPredicted RBP3.43□□□□□ -1.86
SPG11-218ENST00000559754 SPSB1Q96BD6 273 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 VPS39Q96JC1 886 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 MS4A10Q96PG2 267 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 FAM111AQ96PZ2 611 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 SMC6Q96SB8 1091 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 HNRNPABQ99729 332 aaKnown RBP3.43□□□□□ -1.86
SPG11-218ENST00000559754 TMEM39BQ9GZU3 492 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 FZD8Q9H461 694 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 EQTNQ9NQ60 294 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 POLE3Q9NRF9 147 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 PRMT7Q9NVM4 692 aaPredicted RBP3.43□□□□□ -1.86
SPG11-218ENST00000559754 SLC24A2Q9UI40 661 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 STX8Q9UNK0 236 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 RRP15Q9Y3B9 282 aaKnown RBP3.43□□□□□ -1.86
SPG11-218ENST00000559754 CLIC4Q9Y696 253 aa3.43□□□□□ -1.86
SPG11-218ENST00000559754 A0A1W2PPM1 405 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 YDJCA8MPS7 323 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 MAP2K7O14733 419 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 ZBTB43O43298 467 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 CREG1O75629 220 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 AKAP3O75969 853 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 REC8O95072 547 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 MOCS3O95396 460 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 IGLV1-44P01699 117 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 NR3C1P04150 777 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 RLN1P04808 185 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 ERVK-10P10266 1014 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 RPS2P15880 293 aaKnown RBP3.42□□□□□ -1.86
SPG11-218ENST00000559754 GNAZP19086 355 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 DNASE1P24855 282 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 CD27P26842 260 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 CTNNB1P35222 781 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 FRKP42685 505 aaPredicted RBP3.42□□□□□ -1.86
SPG11-218ENST00000559754 ADARP55265 1226 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms