RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 N4BP2L2Q92802 583 aaPredicted RBP13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 PYCR2Q96C36 320 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 CLIP3Q96DZ5 547 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 MED8Q96G25 268 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 PDLIM5Q96HC4 596 aaKnown RBP13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 CCDC138Q96M89 665 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 BBC3Q96PG8 261 aaPredicted RBP13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 GPR22Q99680 433 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 GPN2Q9H9Y4 310 aaPredicted RBP13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 FANCEQ9HB96 536 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 MRPS30Q9NP92 439 aaKnown RBP13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 LHX9Q9NQ69 397 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 IGSF5Q9NSI5 407 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 IRAK4Q9NWZ3 460 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 EURLQ9NYK6 297 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 CROTQ9UKG9 612 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 PADI1Q9ULC6 663 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 PLCL2Q9UPR0 1127 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 SH2B3Q9UQQ2 575 aa13.28□□□□□ -0.28
TSPAN3-205ENST00000558745 LOC105369274A0A096LPK9 316 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 LOC102723532A0A0G2JNH3 316 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 HMX2A2RU54 273 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 E7EQ34 232 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 KATNA1O75449 491 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 OR2B3O76000 313 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 HIST1H2AGP0C0S8 130 aaPredicted RBP13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 CCNYL3P0C7X3 344 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 HIST1H2ADP20671 130 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 CMPK1P30085 196 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 SPRP35270 261 aaPredicted RBP13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 STAT5AP42229 794 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 SLC12A2P55011 1212 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 ABHD18Q0P651 414 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 ARHGAP19Q14CB8 494 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 C18orf21Q32NC0 220 aaPredicted RBP13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 PTCHD3Q3KNS1 767 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 TEX35Q5T0J7 233 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 ATP1A1-AS1Q5TC04 95 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 THEMIS2Q5TEJ8 643 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 FAM69BQ5VUD6 431 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 ICE2Q659A1 982 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 LRRC8EQ6NSJ5 796 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 SBSNQ6UWP8 590 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 GPR155Q7Z3F1 870 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 RELL1Q8IUW5 271 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 OR4N4Q8N0Y3 316 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 DTWD1Q8N5C7 304 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 NKAPQ8N5F7 415 aaKnown RBP13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 OR8K5Q8NH50 307 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 MR1Q95460 341 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 ZUFSPQ96AP4 578 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 HIST1H2AHQ96KK5 128 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 HIST1H2AJQ99878 128 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 H2AFJQ9BTM1 129 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 CHST8Q9H2A9 424 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 ACTR5Q9H9F9 607 aaPredicted RBP13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 SYTL2Q9HCH5 934 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 PCMTD2Q9NV79 361 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 ARL15Q9NXU5 204 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 DHCR7Q9UBM7 475 aaKnown RBP13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 PCDHGA4Q9Y5G9 962 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 SEC16AO15027 2179 aa13.27□□□□□ -0.29
TSPAN3-205ENST00000558745 H7BY64 318 aa13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 MEN1O00255 615 aa13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 TERTO14746 1132 aaKnown RBP13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 CPNE3O75131 537 aaKnown RBP13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 STATHP02808 62 aa13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 CCDC166P0CW27 439 aa13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 HSD17B2P37059 387 aa13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 UCNP55089 124 aa13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 VSX2P58304 361 aaPredicted RBP13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 RPS18P62269 152 aaKnown RBP13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 TBPL1P62380 186 aa13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 PRDX1Q06830 199 aaKnown RBP13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 DLG1Q12959 904 aa13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 SP140Q13342 867 aa13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 MAP7Q14244 749 aa13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 SLMAPQ14BN4 828 aa13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 TSNQ15631 228 aaKnown RBP13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 FBXO48Q5FWF7 155 aa13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 MROH9Q5TGP6 573 aa13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 C16orf46Q6P387 395 aa13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 CYB5D1Q6P9G0 228 aa13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 PAQR7Q86WK9 346 aa13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 TMEM151BQ8IW70 566 aa13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 PRAP1Q96NZ9 151 aa13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 SLC7A5P2Q9GIP4 190 aa13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 CHRNA10Q9GZZ6 450 aa13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 INTS7Q9NVH2 962 aaKnown RBP13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 CTNNAL1Q9UBT7 734 aa13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 PCDHB3Q9Y5E6 796 aa13.26□□□□□ -0.29
TSPAN3-205ENST00000558745 OR2A25A4D2G3 310 aa13.25□□□□□ -0.29
TSPAN3-205ENST00000558745 NCF1BA6NI72 391 aaPredicted RBP13.25□□□□□ -0.29
TSPAN3-205ENST00000558745 ZNF839A8K0R7 811 aa13.25□□□□□ -0.29
TSPAN3-205ENST00000558745 NCF1CA8MVU1 366 aaPredicted RBP13.25□□□□□ -0.29
TSPAN3-205ENST00000558745 TARM1B6A8C7 271 aa13.25□□□□□ -0.29
TSPAN3-205ENST00000558745 MED26O95402 600 aa13.25□□□□□ -0.29
TSPAN3-205ENST00000558745 EIF2S1P05198 315 aaKnown RBP13.25□□□□□ -0.29
TSPAN3-205ENST00000558745 MSL3P1P0C860 447 aa13.25□□□□□ -0.29
TSPAN3-205ENST00000558745 MYBL2P10244 700 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms