RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 TCAIMQ8N3R3 496 aa16.79■□□□□ 0.28
TPM1-214ENST00000558544 ESAMQ96AP7 390 aa16.79■□□□□ 0.28
TPM1-214ENST00000558544 POLR1BQ9H9Y6 1135 aa16.79■□□□□ 0.28
TPM1-214ENST00000558544 SLC6A20Q9NP91 592 aa16.79■□□□□ 0.28
TPM1-214ENST00000558544 INTS7Q9NVH2 962 aaKnown RBP16.79■□□□□ 0.28
TPM1-214ENST00000558544 TMEM216Q9P0N5 145 aa16.79■□□□□ 0.28
TPM1-214ENST00000558544 CPSF2Q9P2I0 782 aaKnown RBP16.79■□□□□ 0.28
TPM1-214ENST00000558544 SH2B3Q9UQQ2 575 aa16.79■□□□□ 0.28
TPM1-214ENST00000558544 SPTBP11277 2137 aa16.79■□□□□ 0.28
TPM1-214ENST00000558544 TRABD2BA6NFA1 517 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 RGS16O15492 202 aaPredicted RBP16.78■□□□□ 0.28
TPM1-214ENST00000558544 GLRA3O75311 464 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 WDR47O94967 919 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 CCNDBP1O95273 360 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 MTHFD2P13995 350 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 FOLR1P15328 257 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 KRT4P19013 534 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 GRIA3P42263 894 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 SLC6A12P48065 614 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 SHC2P98077 582 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 PRDX1Q06830 199 aaKnown RBP16.78■□□□□ 0.28
TPM1-214ENST00000558544 FOXM1Q08050 763 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 CDKL4Q5MAI5 379 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 FCRL6Q6DN72 434 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 C16orf46Q6P387 395 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 FIGLAQ6QHK4 219 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 LCTLQ6UWM7 567 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 LCA5Q86VQ0 697 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 SRRM1Q8IYB3 904 aaKnown RBP16.78■□□□□ 0.28
TPM1-214ENST00000558544 D2HGDHQ8N465 521 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 BMPERQ8N8U9 685 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 PRR11Q96HE9 360 aaPredicted RBP16.78■□□□□ 0.28
TPM1-214ENST00000558544 MRPL57Q9BQC6 102 aaKnown RBP16.78■□□□□ 0.28
TPM1-214ENST00000558544 DPH7Q9BTV6 452 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 NRSN2Q9GZP1 204 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 PCBD2Q9H0N5 130 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 CENPHQ9H3R5 247 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 PDE7BQ9NP56 450 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 CUEDC1Q9NWM3 386 aaPredicted RBP16.78■□□□□ 0.28
TPM1-214ENST00000558544 PCDHGA8Q9Y5G5 932 aa16.78■□□□□ 0.28
TPM1-214ENST00000558544 IGKV1-8A0A0C4DH67 115 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 NRP2O60462 931 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 GSTA1P08263 222 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 GFAPP14136 432 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 GDF5P43026 501 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 HSPA7P48741 367 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 AGTR2P50052 363 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 SLC18A2Q05940 514 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 DEFB110Q30KQ9 67 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 TMTC4Q5T4D3 741 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 CDHR3Q6ZTQ4 885 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 THOC6Q86W42 341 aaKnown RBP16.77■□□□□ 0.28
TPM1-214ENST00000558544 PMEPA1Q969W9 287 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 NXPE2Q96DL1 559 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 TCTN2Q96GX1 697 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 OR4K3Q96R72 315 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 OR6C1Q96RD1 312 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 MRPL46Q9H2W6 279 aaKnown RBP16.77■□□□□ 0.28
TPM1-214ENST00000558544 APMAPQ9HDC9 416 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 FAM60AQ9NP50 221 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 ZNF446Q9NWS9 450 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 DCDC2Q9UHG0 476 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 PTBP2Q9UKA9 531 aaKnown RBP16.77■□□□□ 0.28
TPM1-214ENST00000558544 SLC22A14Q9Y267 594 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 AK5Q9Y6K8 562 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 FRYQ5TBA9 3013 aa16.77■□□□□ 0.28
TPM1-214ENST00000558544 B4E171 279 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 COPEO14579 308 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 MAP2K7O14733 419 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 MAP3K7O43318 606 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 IPO13O94829 963 aaKnown RBP16.77■□□□□ 0.27
TPM1-214ENST00000558544 TNFSF15O95150 251 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 SBK3P0C264 359 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 NPPBP16860 134 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 GGT5P36269 586 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 TSPAN7P41732 249 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 ABATP80404 500 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 MC2RQ01718 297 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 TUBB3Q13509 450 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 RTP5Q14D33 572 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 GPR19Q15760 415 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 PFKFB4Q16877 469 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 ADCK2Q7Z695 626 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 C17orf64Q86WR6 236 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 KLHDC8AQ8IYD2 350 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 RUFY1Q96T51 708 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 CTRCQ99895 268 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 HAUS8Q9BT25 410 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 CNOT10Q9H9A5 744 aaKnown RBP16.77■□□□□ 0.27
TPM1-214ENST00000558544 SLC39A1Q9NY26 324 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 ASB1Q9Y576 335 aa16.77■□□□□ 0.27
TPM1-214ENST00000558544 SDK2Q58EX2 2172 aa16.76■□□□□ 0.27
TPM1-214ENST00000558544 FREM2Q5SZK8 3169 aa16.76■□□□□ 0.27
TPM1-214ENST00000558544 KLK8O60259 260 aa16.76■□□□□ 0.27
TPM1-214ENST00000558544 BRINP1O60477 761 aa16.76■□□□□ 0.27
TPM1-214ENST00000558544 CCNT2O60583 730 aaKnown RBP16.76■□□□□ 0.27
TPM1-214ENST00000558544 SMIM24O75264 130 aa16.76■□□□□ 0.27
TPM1-214ENST00000558544 STK16O75716 305 aa16.76■□□□□ 0.27
TPM1-214ENST00000558544 CDH1P12830 882 aa16.76■□□□□ 0.27
TPM1-214ENST00000558544 CRHR1P34998 444 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms