RNA–Protein interactions for RNA: ENST00000558077.1

ALPK3-202, Transcript of alpha kinase 3, humanhuman

TSL 3

Gene ALPK3, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-202ENST00000558077 PAQR7Q86WK9 346 aa13.01□□□□□ -0.33
ALPK3-202ENST00000558077 OR4N4Q8N0Y3 316 aa13.01□□□□□ -0.33
ALPK3-202ENST00000558077 ZNF655Q8N720 491 aaPredicted RBP13.01□□□□□ -0.33
ALPK3-202ENST00000558077 GABPB2Q8TAK5 448 aaPredicted RBP13.01□□□□□ -0.33
ALPK3-202ENST00000558077 ADAMTS17Q8TE56 1095 aa13.01□□□□□ -0.33
ALPK3-202ENST00000558077 PYROXD1Q8WU10 500 aa13.01□□□□□ -0.33
ALPK3-202ENST00000558077 TRIM44Q96DX7 344 aaPredicted RBP13.01□□□□□ -0.33
ALPK3-202ENST00000558077 CLIP3Q96DZ5 547 aa13.01□□□□□ -0.33
ALPK3-202ENST00000558077 LINGO1Q96FE5 620 aa13.01□□□□□ -0.33
ALPK3-202ENST00000558077 MED8Q96G25 268 aa13.01□□□□□ -0.33
ALPK3-202ENST00000558077 DPH7Q9BTV6 452 aa13.01□□□□□ -0.33
ALPK3-202ENST00000558077 ACAT2Q9BWD1 397 aa13.01□□□□□ -0.33
ALPK3-202ENST00000558077 PHACTR1Q9C0D0 580 aa13.01□□□□□ -0.33
ALPK3-202ENST00000558077 RRAGDQ9NQL2 400 aaPredicted RBP13.01□□□□□ -0.33
ALPK3-202ENST00000558077 FAM114A2Q9NRY5 505 aa13.01□□□□□ -0.33
ALPK3-202ENST00000558077 ZDHHC18Q9NUE0 388 aa13.01□□□□□ -0.33
ALPK3-202ENST00000558077 DHCR7Q9UBM7 475 aaKnown RBP13.01□□□□□ -0.33
ALPK3-202ENST00000558077 AP1M2Q9Y6Q5 423 aa13.01□□□□□ -0.33
ALPK3-202ENST00000558077 ZNF462Q96JM2 2506 aa13.01□□□□□ -0.33
ALPK3-202ENST00000558077 ESYT3A0FGR9 886 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 FAM159BA6NKW6 160 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 SLC16A5O15375 505 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 ZSCAN9O15535 394 aaPredicted RBP13□□□□□ -0.33
ALPK3-202ENST00000558077 ONECUT2O95948 504 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 KLK3P07288 261 aaPredicted RBP13□□□□□ -0.33
ALPK3-202ENST00000558077 HSD17B2P37059 387 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 TAS2R39P59534 338 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 PRDX1Q06830 199 aaKnown RBP13□□□□□ -0.33
ALPK3-202ENST00000558077 CKAP4Q07065 602 aaKnown RBP13□□□□□ -0.33
ALPK3-202ENST00000558077 C19orf57Q0VDD7 668 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 WHAMMP3Q1A5X7 153 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 DEFB109BQ30KR1 87 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 ICE2Q659A1 982 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 FAM45BPQ6NSW5 357 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 BORAQ6PGQ7 559 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 MBOAT1Q6ZNC8 495 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 CAPN12Q6ZSI9 719 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 RNF44Q7L0R7 432 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 STRA8Q7Z7C7 330 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 GPR135Q8IZ08 494 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 MMGT1Q8N4V1 131 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 RAB42Q8N4Z0 105 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 DTWD1Q8N5C7 304 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 ENDOVQ8N8Q3 282 aaKnown RBP13□□□□□ -0.33
ALPK3-202ENST00000558077 GPATCH11Q8N954 259 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 NOA1Q8NC60 698 aaKnown RBP13□□□□□ -0.33
ALPK3-202ENST00000558077 FAM45AQ8TCE6 357 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 PDLIM5Q96HC4 596 aaKnown RBP13□□□□□ -0.33
ALPK3-202ENST00000558077 CATSPER2Q96P56 530 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 PLCD4Q9BRC7 762 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 NLNQ9BYT8 704 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 FAM117AQ9C073 453 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 RAB17Q9H0T7 212 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 STARD5Q9NSY2 213 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 INTS7Q9NVH2 962 aaKnown RBP13□□□□□ -0.33
ALPK3-202ENST00000558077 ZFATQ9P243 1243 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 STOX2Q9P2F5 926 aaPredicted RBP13□□□□□ -0.33
ALPK3-202ENST00000558077 TAC3Q9UHF0 121 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 DMGDHQ9UI17 866 aaKnown RBP13□□□□□ -0.33
ALPK3-202ENST00000558077 UTP11Q9Y3A2 253 aaKnown RBP13□□□□□ -0.33
ALPK3-202ENST00000558077 KCNMB2Q9Y691 235 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 NAV2Q8IVL1 2488 aa13□□□□□ -0.33
ALPK3-202ENST00000558077 A0A0J9YVX5 310 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 TCRBV9S1A1TA0A576 114 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 FITM1A5D6W6 292 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 KLF7O75840 302 aaPredicted RBP12.99□□□□□ -0.33
ALPK3-202ENST00000558077 C8GP07360 202 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 HBQ1P09105 142 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 CMPK1P30085 196 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 RGS4P49798 205 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 CAV1Q03135 178 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 ZNF460Q14592 562 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 UGT8Q16880 541 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 ZC3H12BQ5HYM0 836 aaKnown RBP12.99□□□□□ -0.33
ALPK3-202ENST00000558077 C1orf189Q5VU69 101 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 LRRC8EQ6NSJ5 796 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 SYVN1Q86TM6 617 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 CEP97Q8IW35 865 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 PALM2Q8IXS6 379 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 ARHGEF39Q8N4T4 335 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 PROKR1Q8TCW9 393 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 ANKRD49Q8WVL7 239 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 CCDC138Q96M89 665 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 DPH2Q9BQC3 489 aaPredicted RBP12.99□□□□□ -0.33
ALPK3-202ENST00000558077 RHOJQ9H4E5 214 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 PARVBQ9HBI1 364 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 LRRC4CQ9HCJ2 640 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 CUEDC1Q9NWM3 386 aaPredicted RBP12.99□□□□□ -0.33
ALPK3-202ENST00000558077 GEMIN8Q9NWZ8 242 aaKnown RBP12.99□□□□□ -0.33
ALPK3-202ENST00000558077 TCFL5Q9UL49 500 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 SH2B3Q9UQQ2 575 aa12.99□□□□□ -0.33
ALPK3-202ENST00000558077 MTO1Q9Y2Z2 717 aaKnown RBP12.99□□□□□ -0.33
ALPK3-202ENST00000558077 FAM95CA0A1B0GW59 222 aa12.98□□□□□ -0.33
ALPK3-202ENST00000558077 CDC14CA4D256 554 aa12.98□□□□□ -0.33
ALPK3-202ENST00000558077 SRPX2O60687 465 aaPredicted RBP12.98□□□□□ -0.33
ALPK3-202ENST00000558077 SYF2O95926 243 aaKnown RBP12.98□□□□□ -0.33
ALPK3-202ENST00000558077 GSTA2P09210 222 aa12.98□□□□□ -0.33
ALPK3-202ENST00000558077 ZNF37AP17032 561 aaPredicted RBP12.98□□□□□ -0.33
ALPK3-202ENST00000558077 RPA3P35244 121 aaPredicted RBP12.98□□□□□ -0.33
ALPK3-202ENST00000558077 MAGEA4P43358 317 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms