RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 BOP1Q14137 746 aaKnown RBP15.85■□□□□ 0.13
SHMT2-232ENST00000557487 KCNJ8Q15842 424 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 VMACQ2NL98 169 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 PGS1Q32NB8 556 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 FBXO43Q4G163 708 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 INO80DQ53TQ3 878 aaPredicted RBP15.85■□□□□ 0.13
SHMT2-232ENST00000557487 C1QTNF12Q5T7M4 302 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 CEP68Q76N32 757 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 EIF3MQ7L2H7 374 aaKnown RBP15.85■□□□□ 0.13
SHMT2-232ENST00000557487 SERPINA9Q86WD7 417 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 LYSMD2Q8IV50 215 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 NAT16Q8N8M0 369 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 MYDGFQ969H8 173 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 YME1L1Q96TA2 773 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 TTLL2Q9BWV7 592 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 CRISPLD2Q9H0B8 497 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 CCSER2Q9H7U1 834 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 REEP1Q9H902 201 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 SLC6A13Q9NSD5 602 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 CCDC59Q9P031 241 aaKnown RBP15.85■□□□□ 0.13
SHMT2-232ENST00000557487 PDP1Q9P0J1 537 aaPredicted RBP15.85■□□□□ 0.13
SHMT2-232ENST00000557487 METTL15A6NJ78 407 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 CBX4O00257 560 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 NUAK1O60285 661 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 MYCP01106 439 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-232ENST00000557487 ANXA5P08758 320 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 MYCLP1P12525 358 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-232ENST00000557487 KRT20P35900 424 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 OR1G1P47890 313 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 PXNP49023 591 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-232ENST00000557487 ZNF33BQ06732 778 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 MTAPQ13126 283 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 DGCR6Q14129 220 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 GPRC6AQ5T6X5 926 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 LRRC70Q7Z2Q7 622 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 ZNF280BQ86YH2 543 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 TRPV1Q8NER1 839 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 KBTBD8Q8NFY9 601 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 EPYCQ99645 322 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 GABARAPL3Q9BY60 117 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 ACPTQ9BZG2 426 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 NXF2Q9GZY0 626 aaKnown RBP15.84■□□□□ 0.13
SHMT2-232ENST00000557487 SLC32A1Q9H598 525 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 FARSBQ9NSD9 589 aaKnown RBP15.84■□□□□ 0.13
SHMT2-232ENST00000557487 ABCG2Q9UNQ0 655 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 ZNF232Q9UNY5 417 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 SAMHD1Q9Y3Z3 626 aaKnown RBP15.84■□□□□ 0.13
SHMT2-232ENST00000557487 HTTP42858 3142 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 TRBV5-4A0A0C4DH59 114 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 PABPN1LA6NDY0 278 aaKnown RBP15.84■□□□□ 0.13
SHMT2-232ENST00000557487 AGAP5A6NIR3 686 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 MYO1GB0I1T2 1018 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 MAN1A2O60476 641 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 SLC25A14O95258 325 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-232ENST00000557487 C9P02748 559 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 GPX2P18283 190 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 FSHRP23945 695 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 ALDH4A1P30038 563 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 CCND3P30281 292 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-232ENST00000557487 HOXA9P31269 272 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 KDELR2P33947 212 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 GGT5P36269 586 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 PRKCDQ05655 676 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 NPRL3Q12980 569 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 SELENBP1Q13228 472 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 GPR17Q13304 367 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 VEZF1Q14119 521 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 DUOXA1Q1HG43 343 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 PNCKQ6P2M8 343 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 DOK6Q6PKX4 331 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 CBLL1Q75N03 491 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 AKAP14Q86UN6 197 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 TTC9BQ8N6N2 239 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 PSMA8Q8TAA3 256 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 GPR152Q8TDT2 470 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 CSGALNACT1Q8TDX6 532 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 OVCA2Q8WZ82 227 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 HRASLS5Q96KN8 279 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 HTATIP2Q9BUP3 242 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 APOL5Q9BWW9 433 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 EHD1Q9H4M9 534 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 TESMINQ9Y4I5 508 aa15.84■□□□□ 0.13
SHMT2-232ENST00000557487 MTMR11A4FU01 709 aa15.83■□□□□ 0.12
SHMT2-232ENST00000557487 AIREO43918 545 aa15.83■□□□□ 0.12
SHMT2-232ENST00000557487 SNX4O95219 450 aa15.83■□□□□ 0.12
SHMT2-232ENST00000557487 PRAMEF1O95521 474 aa15.83■□□□□ 0.12
SHMT2-232ENST00000557487 CYP4B1P13584 511 aa15.83■□□□□ 0.12
SHMT2-232ENST00000557487 CTPS1P17812 591 aa15.83■□□□□ 0.12
SHMT2-232ENST00000557487 PRPS1L1P21108 318 aa15.83■□□□□ 0.12
SHMT2-232ENST00000557487 PTX3P26022 381 aaPredicted RBP15.83■□□□□ 0.12
SHMT2-232ENST00000557487 KIR3DL1P43629 444 aa15.83■□□□□ 0.12
SHMT2-232ENST00000557487 AP1S1P61966 158 aa15.83■□□□□ 0.12
SHMT2-232ENST00000557487 RPS24P62847 133 aaKnown RBP15.83■□□□□ 0.12
SHMT2-232ENST00000557487 SRSF11Q05519 484 aaKnown RBP15.83■□□□□ 0.12
SHMT2-232ENST00000557487 GPR33Q49SQ1 333 aa15.83■□□□□ 0.12
SHMT2-232ENST00000557487 SGO1Q5FBB7 561 aa15.83■□□□□ 0.12
SHMT2-232ENST00000557487 NEK5Q6P3R8 708 aa15.83■□□□□ 0.12
SHMT2-232ENST00000557487 CCDC80Q76M96 950 aa15.83■□□□□ 0.12
SHMT2-232ENST00000557487 P3H2Q8IVL5 708 aa15.83■□□□□ 0.12
SHMT2-232ENST00000557487 ATG16L2Q8NAA4 619 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms