RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 PRR7Q8TB68 274 aa21.6■■□□□ 1.05
ACTN1-220ENST00000556433 SSC4DQ8WTU2 575 aa21.6■■□□□ 1.05
ACTN1-220ENST00000556433 TRIM56Q9BRZ2 755 aaKnown RBP21.6■■□□□ 1.05
ACTN1-220ENST00000556433 DPH7Q9BTV6 452 aa21.6■■□□□ 1.05
ACTN1-220ENST00000556433 ZNF304Q9HCX3 659 aa21.6■■□□□ 1.05
ACTN1-220ENST00000556433 ASF1BQ9NVP2 202 aa21.6■■□□□ 1.05
ACTN1-220ENST00000556433 HS3ST3B1Q9Y662 390 aa21.6■■□□□ 1.05
ACTN1-220ENST00000556433 SPTAN1Q13813 2472 aaKnown RBP21.6■■□□□ 1.05
ACTN1-220ENST00000556433 SPTBN1Q01082 2364 aaKnown RBP21.59■■□□□ 1.05
ACTN1-220ENST00000556433 ARHGEF33A8MVX0 844 aa21.59■■□□□ 1.05
ACTN1-220ENST00000556433 E5RI56 91 aa21.59■■□□□ 1.05
ACTN1-220ENST00000556433 MED26O95402 600 aa21.59■■□□□ 1.05
ACTN1-220ENST00000556433 MAGEA6P43360 314 aa21.59■■□□□ 1.05
ACTN1-220ENST00000556433 RBBP7Q16576 425 aa21.59■■□□□ 1.05
ACTN1-220ENST00000556433 KLHL38Q2WGJ6 581 aa21.59■■□□□ 1.05
ACTN1-220ENST00000556433 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.59■■□□□ 1.05
ACTN1-220ENST00000556433 ANKRD22Q5VYY1 191 aa21.59■■□□□ 1.05
ACTN1-220ENST00000556433 ARMC3Q5W041 872 aa21.59■■□□□ 1.05
ACTN1-220ENST00000556433 CAND1Q86VP6 1230 aaKnown RBP21.59■■□□□ 1.05
ACTN1-220ENST00000556433 CILP2Q8IUL8 1156 aa21.59■■□□□ 1.05
ACTN1-220ENST00000556433 SMPDL3AQ92484 453 aa21.59■■□□□ 1.05
ACTN1-220ENST00000556433 SEMA3GQ9NS98 782 aa21.59■■□□□ 1.05
ACTN1-220ENST00000556433 SAMD15Q9P1V8 674 aa21.59■■□□□ 1.05
ACTN1-220ENST00000556433 STOX2Q9P2F5 926 aaPredicted RBP21.59■■□□□ 1.05
ACTN1-220ENST00000556433 VPS9D1Q9Y2B5 631 aa21.59■■□□□ 1.05
ACTN1-220ENST00000556433 ICE1Q9Y2F5 2266 aa21.59■■□□□ 1.05
ACTN1-220ENST00000556433 MAGEB16A2A368 324 aa21.58■■□□□ 1.05
ACTN1-220ENST00000556433 OR2A25A4D2G3 310 aa21.58■■□□□ 1.05
ACTN1-220ENST00000556433 VSTM2BA6NLU5 285 aa21.58■■□□□ 1.05
ACTN1-220ENST00000556433 RPA3P35244 121 aaPredicted RBP21.58■■□□□ 1.05
ACTN1-220ENST00000556433 GLRBP48167 497 aa21.58■■□□□ 1.05
ACTN1-220ENST00000556433 TSTA3Q13630 321 aaPredicted RBP21.58■■□□□ 1.05
ACTN1-220ENST00000556433 DHX34Q14147 1143 aaKnown RBP21.58■■□□□ 1.05
ACTN1-220ENST00000556433 NAA25Q14CX7 972 aa21.58■■□□□ 1.05
ACTN1-220ENST00000556433 IRAK1BP1Q5VVH5 260 aa21.58■■□□□ 1.05
ACTN1-220ENST00000556433 PRMT9Q6P2P2 845 aa21.58■■□□□ 1.05
ACTN1-220ENST00000556433 TTC27Q6P3X3 843 aa21.58■■□□□ 1.05
ACTN1-220ENST00000556433 SUSD1Q6UWL2 747 aa21.58■■□□□ 1.05
ACTN1-220ENST00000556433 Q6ZS92 163 aa21.58■■□□□ 1.05
ACTN1-220ENST00000556433 RNF44Q7L0R7 432 aa21.58■■□□□ 1.05
ACTN1-220ENST00000556433 PARP9Q8IXQ6 854 aa21.58■■□□□ 1.05
ACTN1-220ENST00000556433 MAGOHBQ96A72 148 aaKnown RBP21.58■■□□□ 1.05
ACTN1-220ENST00000556433 VPS50Q96JG6 964 aa21.58■■□□□ 1.05
ACTN1-220ENST00000556433 ZFYVE21Q9BQ24 234 aa21.58■■□□□ 1.05
ACTN1-220ENST00000556433 MRPS30Q9NP92 439 aaKnown RBP21.58■■□□□ 1.05
ACTN1-220ENST00000556433 FAM114A2Q9NRY5 505 aa21.58■■□□□ 1.05
ACTN1-220ENST00000556433 INTS10Q9NVR2 710 aaKnown RBP21.58■■□□□ 1.05
ACTN1-220ENST00000556433 FAM237BA0A1B0GVD1 139 aa21.57■■□□□ 1.04
ACTN1-220ENST00000556433 CTAGE9A4FU28 777 aa21.57■■□□□ 1.04
ACTN1-220ENST00000556433 SDR42E2A6NKP2 422 aa21.57■■□□□ 1.04
ACTN1-220ENST00000556433 H0YGG7 62 aa21.57■■□□□ 1.04
ACTN1-220ENST00000556433 MYO1CO00159 1063 aa21.57■■□□□ 1.04
ACTN1-220ENST00000556433 PSIP1O75475 530 aaKnown RBP21.57■■□□□ 1.04
ACTN1-220ENST00000556433 CATP04040 527 aaKnown RBP21.57■■□□□ 1.04
ACTN1-220ENST00000556433 ERVK-10P10266 1014 aa21.57■■□□□ 1.04
ACTN1-220ENST00000556433 ERGP11308 486 aa21.57■■□□□ 1.04
ACTN1-220ENST00000556433 MLNP12872 115 aa21.57■■□□□ 1.04
ACTN1-220ENST00000556433 ARF3P61204 181 aaPredicted RBP21.57■■□□□ 1.04
ACTN1-220ENST00000556433 CCZ1BP86790 482 aa21.57■■□□□ 1.04
ACTN1-220ENST00000556433 CCZ1P86791 482 aaPredicted RBP21.57■■□□□ 1.04
ACTN1-220ENST00000556433 OCA2Q04671 838 aa21.57■■□□□ 1.04
ACTN1-220ENST00000556433 THOC5Q13769 683 aaKnown RBP21.57■■□□□ 1.04
ACTN1-220ENST00000556433 NR6A1Q15406 480 aa21.57■■□□□ 1.04
ACTN1-220ENST00000556433 MUM1Q2TAK8 710 aa21.57■■□□□ 1.04
ACTN1-220ENST00000556433 TUBB8Q3ZCM7 444 aa21.57■■□□□ 1.04
ACTN1-220ENST00000556433 C4orf17Q53FE4 359 aa21.57■■□□□ 1.04
ACTN1-220ENST00000556433 STT3BQ8TCJ2 826 aa21.57■■□□□ 1.04
ACTN1-220ENST00000556433 INPP5DQ92835 1189 aa21.57■■□□□ 1.04
ACTN1-220ENST00000556433 ZNF669Q96BR6 464 aaPredicted RBP21.57■■□□□ 1.04
ACTN1-220ENST00000556433 PKP4Q99569 1192 aa21.57■■□□□ 1.04
ACTN1-220ENST00000556433 CRB3Q9BUF7 120 aa21.57■■□□□ 1.04
ACTN1-220ENST00000556433 CUEDC1Q9NWM3 386 aaPredicted RBP21.57■■□□□ 1.04
ACTN1-220ENST00000556433 PLEKHB1Q9UF11 243 aaPredicted RBP21.57■■□□□ 1.04
ACTN1-220ENST00000556433 PPP2R2CQ9Y2T4 447 aa21.57■■□□□ 1.04
ACTN1-220ENST00000556433 COPG1Q9Y678 874 aaKnown RBP21.57■■□□□ 1.04
ACTN1-220ENST00000556433 USP1O94782 785 aa21.56■■□□□ 1.04
ACTN1-220ENST00000556433 CBX6O95503 412 aa21.56■■□□□ 1.04
ACTN1-220ENST00000556433 HSD17B2P37059 387 aa21.56■■□□□ 1.04
ACTN1-220ENST00000556433 CARSP49589 748 aaKnown RBP21.56■■□□□ 1.04
ACTN1-220ENST00000556433 CLCN7P51798 805 aa21.56■■□□□ 1.04
ACTN1-220ENST00000556433 ARHGAP19Q14CB8 494 aa21.56■■□□□ 1.04
ACTN1-220ENST00000556433 HIF1AQ16665 826 aa21.56■■□□□ 1.04
ACTN1-220ENST00000556433 TTLL9Q3SXZ7 439 aa21.56■■□□□ 1.04
ACTN1-220ENST00000556433 CRB2Q5IJ48 1285 aa21.56■■□□□ 1.04
ACTN1-220ENST00000556433 AGAP7PQ5VUJ5 663 aa21.56■■□□□ 1.04
ACTN1-220ENST00000556433 ZNF470Q6ECI4 717 aa21.56■■□□□ 1.04
ACTN1-220ENST00000556433 CUZD1Q86UP6 607 aa21.56■■□□□ 1.04
ACTN1-220ENST00000556433 PRSS58Q8IYP2 241 aa21.56■■□□□ 1.04
ACTN1-220ENST00000556433 MCUQ8NE86 351 aa21.56■■□□□ 1.04
ACTN1-220ENST00000556433 OR11G2Q8NGC1 345 aa21.56■■□□□ 1.04
ACTN1-220ENST00000556433 MIEF2Q96C03 454 aa21.56■■□□□ 1.04
ACTN1-220ENST00000556433 MS4A14Q96JA4 679 aa21.56■■□□□ 1.04
ACTN1-220ENST00000556433 CABS1Q96KC9 395 aa21.56■■□□□ 1.04
ACTN1-220ENST00000556433 AGAP4Q96P64 663 aa21.56■■□□□ 1.04
ACTN1-220ENST00000556433 SLC30A3Q99726 388 aa21.56■■□□□ 1.04
ACTN1-220ENST00000556433 PLCD4Q9BRC7 762 aa21.56■■□□□ 1.04
ACTN1-220ENST00000556433 ZNF282Q9UDV7 671 aaPredicted RBP21.56■■□□□ 1.04
ACTN1-220ENST00000556433 GOLGA8MH3BSY2 632 aa21.55■■□□□ 1.04
ACTN1-220ENST00000556433 VPS26AO75436 327 aa21.55■■□□□ 1.04
ACTN1-220ENST00000556433 F7P08709 466 aaPredicted RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms