RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 SEMA3GQ9NS98 782 aa14.76□□□□□ -0.05
SNX6-205ENST00000555648 SLC22A11Q9NSA0 550 aa14.76□□□□□ -0.05
SNX6-205ENST00000555648 FBXL4Q9UKA2 621 aa14.76□□□□□ -0.05
SNX6-205ENST00000555648 CDC14AQ9UNH5 594 aa14.76□□□□□ -0.05
SNX6-205ENST00000555648 B3GNT3Q9Y2A9 372 aa14.76□□□□□ -0.05
SNX6-205ENST00000555648 KLK4Q9Y5K2 254 aa14.76□□□□□ -0.05
SNX6-205ENST00000555648 COMMD10Q9Y6G5 202 aa14.76□□□□□ -0.05
SNX6-205ENST00000555648 PIKFYVEQ9Y2I7 2098 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 FITM1A5D6W6 292 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 MYO1CO00159 1063 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 PRPF4O43172 522 aaKnown RBP eCLIP14.75□□□□□ -0.05
SNX6-205ENST00000555648 ZSCAN12O43309 604 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 ZBTB14O43829 449 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 KIF5CO60282 957 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 PSIP1O75475 530 aaKnown RBP14.75□□□□□ -0.05
SNX6-205ENST00000555648 ENO3P13929 434 aaPredicted RBP14.75□□□□□ -0.05
SNX6-205ENST00000555648 FNTAP49354 379 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 CARSP49589 748 aaKnown RBP14.75□□□□□ -0.05
SNX6-205ENST00000555648 PNLIPRP1P54315 467 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 GBX1Q14549 363 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 CYP1B1Q16678 543 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.75□□□□□ -0.05
SNX6-205ENST00000555648 FRMPD2BQ6IN97 320 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 RNF44Q7L0R7 432 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 DENND6AQ8IWF6 608 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 REXO1L1PQ8IX06 675 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 PPIL6Q8IXY8 311 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 KCNJ9Q92806 393 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 INPP5DQ92835 1189 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 MIEF2Q96C03 454 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 ZNF285Q96NJ3 590 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 PKP4Q99569 1192 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 TRIM56Q9BRZ2 755 aaKnown RBP14.75□□□□□ -0.05
SNX6-205ENST00000555648 FAM167BQ9BTA0 163 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 CRB3Q9BUF7 120 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 SLC26A1Q9H2B4 701 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 KLHL42Q9P2K6 505 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 GALPQ9UBC7 116 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 ZNF282Q9UDV7 671 aaPredicted RBP14.75□□□□□ -0.05
SNX6-205ENST00000555648 TAC3Q9UHF0 121 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 SPTBP11277 2137 aa14.75□□□□□ -0.05
SNX6-205ENST00000555648 LOC105369274A0A096LPK9 316 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 LOC102723532A0A0G2JNH3 316 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 A0A1W2PPV9 198 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 OR2A25A4D2G3 310 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 SMAPO00193 183 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 TXNDC9O14530 226 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 ONECUT2O95948 504 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 ANXA5P08758 320 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 FBLP22087 321 aaKnown RBP14.74□□□□□ -0.05
SNX6-205ENST00000555648 GCGRP47871 477 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 UQCRFS1P47985 274 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 CLCN7P51798 805 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 CUL1Q13616 776 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 PTK6Q13882 451 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 TUBB8Q3ZCM7 444 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 PRAMEF13Q5VWM6 474 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 UGT3A1Q6NUS8 523 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 PALM2Q8IXS6 379 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 PRSS58Q8IYP2 241 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 OR4N4Q8N0Y3 316 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 CSNK1A1LQ8N752 337 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.74□□□□□ -0.05
SNX6-205ENST00000555648 OSBPL9Q96SU4 736 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 SPSB2Q99619 263 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 EBNA1BP2Q99848 306 aaKnown RBP14.74□□□□□ -0.05
SNX6-205ENST00000555648 PLCD4Q9BRC7 762 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 ZNF552Q9H707 407 aaPredicted RBP14.74□□□□□ -0.05
SNX6-205ENST00000555648 SLC6A20Q9NP91 592 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 CTSFQ9UBX1 484 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 ASIC3Q9UHC3 531 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 FBXO5Q9UKT4 447 aa14.74□□□□□ -0.05
SNX6-205ENST00000555648 ZCWPW2A0A1B0GU75 182 aa14.73□□□□□ -0.05
SNX6-205ENST00000555648 PABPN1LA6NDY0 278 aaKnown RBP14.73□□□□□ -0.05
SNX6-205ENST00000555648 H0YGG7 62 aa14.73□□□□□ -0.05
SNX6-205ENST00000555648 MASP2O00187 686 aa14.73□□□□□ -0.05
SNX6-205ENST00000555648 MAP2K7O14733 419 aa14.73□□□□□ -0.05
SNX6-205ENST00000555648 UQCRHP07919 91 aa14.73□□□□□ -0.05
SNX6-205ENST00000555648 MPC1LP0DKB6 136 aa14.73□□□□□ -0.05
SNX6-205ENST00000555648 SLC1A2P43004 574 aa14.73□□□□□ -0.05
SNX6-205ENST00000555648 GLRBP48167 497 aa14.73□□□□□ -0.05
SNX6-205ENST00000555648 SOX8P57073 446 aa14.73□□□□□ -0.05
SNX6-205ENST00000555648 ARF3P61204 181 aaPredicted RBP14.73□□□□□ -0.05
SNX6-205ENST00000555648 ABATP80404 500 aa14.73□□□□□ -0.05
SNX6-205ENST00000555648 PRDX1Q06830 199 aaKnown RBP14.73□□□□□ -0.05
SNX6-205ENST00000555648 ELOAQ14241 798 aaKnown RBP14.73□□□□□ -0.05
SNX6-205ENST00000555648 PLEKHN1Q494U1 663 aaPredicted RBP14.73□□□□□ -0.05
SNX6-205ENST00000555648 PRR30Q53SZ7 412 aaPredicted RBP14.73□□□□□ -0.05
SNX6-205ENST00000555648 AGAP7PQ5VUJ5 663 aa14.73□□□□□ -0.05
SNX6-205ENST00000555648 ICE2Q659A1 982 aa14.73□□□□□ -0.05
SNX6-205ENST00000555648 IGFL3Q6UXB1 125 aa14.73□□□□□ -0.05
SNX6-205ENST00000555648 COX15Q7KZN9 410 aa14.73□□□□□ -0.05
SNX6-205ENST00000555648 PARP9Q8IXQ6 854 aa14.73□□□□□ -0.05
SNX6-205ENST00000555648 SLC35F6Q8N357 371 aa14.73□□□□□ -0.05
SNX6-205ENST00000555648 ACTRT1Q8TDG2 376 aa14.73□□□□□ -0.05
SNX6-205ENST00000555648 AGAP4Q96P64 663 aa14.73□□□□□ -0.05
SNX6-205ENST00000555648 GPR21Q99679 349 aa14.73□□□□□ -0.05
SNX6-205ENST00000555648 ASH1LQ9NR48 2969 aaKnown RBP14.73□□□□□ -0.05
SNX6-205ENST00000555648 ENAMQ9NRM1 1142 aa14.73□□□□□ -0.05
SNX6-205ENST00000555648 IARS2Q9NSE4 1012 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms