RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 CORO1CQ9ULV4 474 aaPredicted RBP19.66■□□□□ 0.74
VTI1B-205ENST00000555543 SRPK3Q9UPE1 567 aa19.66■□□□□ 0.74
VTI1B-205ENST00000555543 ITGAXP20702 1163 aa19.65■□□□□ 0.74
VTI1B-205ENST00000555543 CMPK1P30085 196 aa19.65■□□□□ 0.74
VTI1B-205ENST00000555543 HSD17B2P37059 387 aa19.65■□□□□ 0.74
VTI1B-205ENST00000555543 RGS4P49798 205 aa19.65■□□□□ 0.74
VTI1B-205ENST00000555543 KCNAB2Q13303 367 aa19.65■□□□□ 0.74
VTI1B-205ENST00000555543 SLC9A5Q14940 896 aa19.65■□□□□ 0.74
VTI1B-205ENST00000555543 ZC3H12BQ5HYM0 836 aaKnown RBP19.65■□□□□ 0.74
VTI1B-205ENST00000555543 LRRC8EQ6NSJ5 796 aa19.65■□□□□ 0.74
VTI1B-205ENST00000555543 RNF44Q7L0R7 432 aa19.65■□□□□ 0.74
VTI1B-205ENST00000555543 ZC3HC1Q86WB0 502 aaKnown RBP19.65■□□□□ 0.74
VTI1B-205ENST00000555543 PROKR1Q8TCW9 393 aa19.65■□□□□ 0.74
VTI1B-205ENST00000555543 SELENOSQ9BQE4 189 aa19.65■□□□□ 0.74
VTI1B-205ENST00000555543 ADNPQ9H2P0 1102 aa19.65■□□□□ 0.74
VTI1B-205ENST00000555543 ABCF3Q9NUQ8 709 aa19.65■□□□□ 0.74
VTI1B-205ENST00000555543 SNX7Q9UNH6 387 aa19.65■□□□□ 0.74
VTI1B-205ENST00000555543 PDE10AQ9Y233 779 aa19.65■□□□□ 0.74
VTI1B-205ENST00000555543 VWA7Q9Y334 891 aa19.65■□□□□ 0.74
VTI1B-205ENST00000555543 UTP11Q9Y3A2 253 aaKnown RBP19.65■□□□□ 0.74
VTI1B-205ENST00000555543 LOC105369274A0A096LPK9 316 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 LOC102723532A0A0G2JNH3 316 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 A0A0J9YVX5 310 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 ZNF839A8K0R7 811 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 AGXTP21549 392 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 SSTR1P30872 391 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 VSX2P58304 361 aaPredicted RBP19.64■□□□□ 0.73
VTI1B-205ENST00000555543 NFATC3Q12968 1075 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 PDAP1Q13442 181 aaKnown RBP19.64■□□□□ 0.73
VTI1B-205ENST00000555543 PHKG1Q16816 387 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 ICE2Q659A1 982 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 FAM45BPQ6NSW5 357 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 ZDHHC24Q6UX98 284 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 STRA8Q7Z7C7 330 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 OR4N4Q8N0Y3 316 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 MYO1HQ8N1T3 1032 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 FAM45AQ8TCE6 357 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 FBXO25Q8TCJ0 367 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 ADAMTS17Q8TE56 1095 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 PYROXD1Q8WU10 500 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 NDC1Q9BTX1 674 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 FAM117AQ9C073 453 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 MRPS30Q9NP92 439 aaKnown RBP19.64■□□□□ 0.73
VTI1B-205ENST00000555543 ENAMQ9NRM1 1142 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 SLC22A11Q9NSA0 550 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 TXLNGQ9NUQ3 528 aa19.64■□□□□ 0.73
VTI1B-205ENST00000555543 STOX2Q9P2F5 926 aaPredicted RBP19.64■□□□□ 0.73
VTI1B-205ENST00000555543 HELZ2Q9BYK8 2649 aaKnown RBP19.63■□□□□ 0.73
VTI1B-205ENST00000555543 PCSK5Q92824 1860 aa19.63■□□□□ 0.73
VTI1B-205ENST00000555543 C9J4A7 227 aa19.63■□□□□ 0.73
VTI1B-205ENST00000555543 EIF3HO15372 352 aaKnown RBP eCLIP19.63■□□□□ 0.73
VTI1B-205ENST00000555543 CNOT3O75175 753 aaKnown RBP19.63■□□□□ 0.73
VTI1B-205ENST00000555543 URI1O94763 535 aaPredicted RBP19.63■□□□□ 0.73
VTI1B-205ENST00000555543 C8GP07360 202 aa19.63■□□□□ 0.73
VTI1B-205ENST00000555543 PLTPP55058 493 aa19.63■□□□□ 0.73
VTI1B-205ENST00000555543 FOXL2P58012 376 aa19.63■□□□□ 0.73
VTI1B-205ENST00000555543 DCDP81605 110 aaKnown RBP19.63■□□□□ 0.73
VTI1B-205ENST00000555543 PRDX1Q06830 199 aaKnown RBP19.63■□□□□ 0.73
VTI1B-205ENST00000555543 CKAP4Q07065 602 aaKnown RBP19.63■□□□□ 0.73
VTI1B-205ENST00000555543 SP140Q13342 867 aa19.63■□□□□ 0.73
VTI1B-205ENST00000555543 ZNF425Q6IV72 752 aa19.63■□□□□ 0.73
VTI1B-205ENST00000555543 TMEM207Q6UWW9 146 aa19.63■□□□□ 0.73
VTI1B-205ENST00000555543 TTLL10Q6ZVT0 673 aa19.63■□□□□ 0.73
VTI1B-205ENST00000555543 SLC26A11Q86WA9 606 aa19.63■□□□□ 0.73
VTI1B-205ENST00000555543 PAQR7Q86WK9 346 aa19.63■□□□□ 0.73
VTI1B-205ENST00000555543 TMEM151BQ8IW70 566 aa19.63■□□□□ 0.73
VTI1B-205ENST00000555543 DTWD1Q8N5C7 304 aa19.63■□□□□ 0.73
VTI1B-205ENST00000555543 SEC14L1Q92503 715 aa19.63■□□□□ 0.73
VTI1B-205ENST00000555543 PLCD4Q9BRC7 762 aa19.63■□□□□ 0.73
VTI1B-205ENST00000555543 MCMBPQ9BTE3 642 aa19.63■□□□□ 0.73
VTI1B-205ENST00000555543 RAB17Q9H0T7 212 aa19.63■□□□□ 0.73
VTI1B-205ENST00000555543 IKZF3Q9UKT9 509 aa19.63■□□□□ 0.73
VTI1B-205ENST00000555543 MAN2B2Q9Y2E5 1009 aa19.63■□□□□ 0.73
VTI1B-205ENST00000555543 FAM95CA0A1B0GW59 222 aa19.62■□□□□ 0.73
VTI1B-205ENST00000555543 ESYT3A0FGR9 886 aa19.62■□□□□ 0.73
VTI1B-205ENST00000555543 FITM1A5D6W6 292 aa19.62■□□□□ 0.73
VTI1B-205ENST00000555543 CXorf49A8MYA2 514 aaPredicted RBP19.62■□□□□ 0.73
VTI1B-205ENST00000555543 KLF7O75840 302 aaPredicted RBP19.62■□□□□ 0.73
VTI1B-205ENST00000555543 MED26O95402 600 aa19.62■□□□□ 0.73
VTI1B-205ENST00000555543 IL2P60568 153 aa19.62■□□□□ 0.73
VTI1B-205ENST00000555543 TBPL1P62380 186 aa19.62■□□□□ 0.73
VTI1B-205ENST00000555543 SLC7A5Q01650 507 aa19.62■□□□□ 0.73
VTI1B-205ENST00000555543 ZNF460Q14592 562 aa19.62■□□□□ 0.73
VTI1B-205ENST00000555543 NKAIN1Q4KMZ8 207 aa19.62■□□□□ 0.73
VTI1B-205ENST00000555543 TCTE1Q5JU00 501 aa19.62■□□□□ 0.73
VTI1B-205ENST00000555543 WASHC2DQ5SRD0 308 aa19.62■□□□□ 0.73
VTI1B-205ENST00000555543 MLIPQ5VWP3 458 aa19.62■□□□□ 0.73
VTI1B-205ENST00000555543 CPZQ66K79 652 aa19.62■□□□□ 0.73
VTI1B-205ENST00000555543 FBXO42Q6P3S6 717 aa19.62■□□□□ 0.73
VTI1B-205ENST00000555543 MCOLN3Q8TDD5 553 aa19.62■□□□□ 0.73
VTI1B-205ENST00000555543 ZFYVE21Q9BQ24 234 aa19.62■□□□□ 0.73
VTI1B-205ENST00000555543 SLC25A18Q9H1K4 315 aa19.62■□□□□ 0.73
VTI1B-205ENST00000555543 PARVBQ9HBI1 364 aa19.62■□□□□ 0.73
VTI1B-205ENST00000555543 CUTCQ9NTM9 273 aa19.62■□□□□ 0.73
VTI1B-205ENST00000555543 CUEDC1Q9NWM3 386 aaPredicted RBP19.62■□□□□ 0.73
VTI1B-205ENST00000555543 ANKMY1Q9P2S6 941 aa19.62■□□□□ 0.73
VTI1B-205ENST00000555543 TUBD1Q9UJT1 453 aa19.62■□□□□ 0.73
VTI1B-205ENST00000555543 PCM1Q15154 2024 aa19.62■□□□□ 0.73
VTI1B-205ENST00000555543 HEATR5BQ9P2D3 2071 aa19.61■□□□□ 0.73
VTI1B-205ENST00000555543 BAHCC1Q9P281 2608 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms