RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ADNPQ9H2P0 1102 aa2.19□□□□□ -2.06
SRP54-207ENST00000555535 GPN1Q9HCN4 374 aaPredicted RBP2.19□□□□□ -2.06
SRP54-207ENST00000555535 PGAP2Q9UHJ9 254 aa2.19□□□□□ -2.06
SRP54-207ENST00000555535 NME7Q9Y5B8 376 aa2.19□□□□□ -2.06
SRP54-207ENST00000555535 UMODL1Q5DID0 1318 aa2.18□□□□□ -2.06
SRP54-207ENST00000555535 IGLV4-3A0A075B6K6 122 aa2.18□□□□□ -2.06
SRP54-207ENST00000555535 H0YAE9 185 aa2.18□□□□□ -2.06
SRP54-207ENST00000555535 TEX28O15482 410 aa2.18□□□□□ -2.06
SRP54-207ENST00000555535 ATP6V1B1P15313 513 aa2.18□□□□□ -2.06
SRP54-207ENST00000555535 MFAP4P55083 255 aa2.18□□□□□ -2.06
SRP54-207ENST00000555535 TMEM132DQ14C87 1099 aa2.18□□□□□ -2.06
SRP54-207ENST00000555535 REG3GQ6UW15 175 aa2.18□□□□□ -2.06
SRP54-207ENST00000555535 C11orf42Q8N5U0 333 aa2.18□□□□□ -2.06
SRP54-207ENST00000555535 RTL3Q8N8U3 475 aaKnown RBP2.18□□□□□ -2.06
SRP54-207ENST00000555535 SLC37A3Q8NCC5 494 aa2.18□□□□□ -2.06
SRP54-207ENST00000555535 C9orf43Q8TAL5 461 aaPredicted RBP2.18□□□□□ -2.06
SRP54-207ENST00000555535 SSMEM1Q8WWF3 244 aa2.18□□□□□ -2.06
SRP54-207ENST00000555535 C4orf45Q96LM5 186 aa2.18□□□□□ -2.06
SRP54-207ENST00000555535 PSMB7Q99436 277 aa2.18□□□□□ -2.06
SRP54-207ENST00000555535 LPAR4Q99677 370 aa2.18□□□□□ -2.06
SRP54-207ENST00000555535 SLC26A6Q9BXS9 759 aa2.18□□□□□ -2.06
SRP54-207ENST00000555535 TRPV4Q9HBA0 871 aa2.18□□□□□ -2.06
SRP54-207ENST00000555535 GKN1Q9NS71 199 aa2.18□□□□□ -2.06
SRP54-207ENST00000555535 IRAK4Q9NWZ3 460 aa2.18□□□□□ -2.06
SRP54-207ENST00000555535 WSB2Q9NYS7 404 aaPredicted RBP2.18□□□□□ -2.06
SRP54-207ENST00000555535 SEC63Q9UGP8 760 aaKnown RBP2.18□□□□□ -2.06
SRP54-207ENST00000555535 A0A1W2PQ72 361 aa2.17□□□□□ -2.06
SRP54-207ENST00000555535 B4E171 279 aa2.17□□□□□ -2.06
SRP54-207ENST00000555535 TOMM70O94826 608 aa2.17□□□□□ -2.06
SRP54-207ENST00000555535 SLCO2B1O94956 709 aa2.17□□□□□ -2.06
SRP54-207ENST00000555535 VPREB1P12018 145 aa2.17□□□□□ -2.06
SRP54-207ENST00000555535 ARL3P36405 182 aa2.17□□□□□ -2.06
SRP54-207ENST00000555535 HADHAP40939 763 aa2.17□□□□□ -2.06
SRP54-207ENST00000555535 TSPAN7P41732 249 aa2.17□□□□□ -2.06
SRP54-207ENST00000555535 SLC9A3P48764 834 aa2.17□□□□□ -2.06
SRP54-207ENST00000555535 PRELPP51888 382 aa2.17□□□□□ -2.06
SRP54-207ENST00000555535 MAMLD1Q13495 774 aa2.17□□□□□ -2.06
SRP54-207ENST00000555535 MS4A18Q3C1V0 323 aa2.17□□□□□ -2.06
SRP54-207ENST00000555535 RNASEH2BQ5TBB1 312 aaKnown RBP2.17□□□□□ -2.06
SRP54-207ENST00000555535 HAUS3Q68CZ6 603 aa2.17□□□□□ -2.06
SRP54-207ENST00000555535 LCLAT1Q6UWP7 414 aa2.17□□□□□ -2.06
SRP54-207ENST00000555535 Q7L0L9 218 aa2.17□□□□□ -2.06
SRP54-207ENST00000555535 ZC3H3Q8IXZ2 948 aaKnown RBP2.17□□□□□ -2.06
SRP54-207ENST00000555535 ADGRF2Q8IZF7 708 aa2.17□□□□□ -2.06
SRP54-207ENST00000555535 TLE6Q9H808 572 aa2.17□□□□□ -2.06
SRP54-207ENST00000555535 SEPT11Q9NVA2 429 aaKnown RBP2.17□□□□□ -2.06
SRP54-207ENST00000555535 GTSE1Q9NYZ3 720 aa2.17□□□□□ -2.06
SRP54-207ENST00000555535 AASSQ9UDR5 926 aa2.17□□□□□ -2.06
SRP54-207ENST00000555535 C19orf25Q9UFG5 118 aaPredicted RBP2.17□□□□□ -2.06
SRP54-207ENST00000555535 TMED3Q9Y3Q3 217 aa2.17□□□□□ -2.06
SRP54-207ENST00000555535 R4GN57 208 aa2.17□□□□□ -2.06
SRP54-207ENST00000555535 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.16□□□□□ -2.06
SRP54-207ENST00000555535 K7EQD1 137 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 TLX2O43763 284 aaPredicted RBP2.16□□□□□ -2.06
SRP54-207ENST00000555535 PRDM1O75626 825 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 NXPH4O95158 308 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 HAPLN1P10915 354 aaPredicted RBP2.16□□□□□ -2.06
SRP54-207ENST00000555535 SELEP16581 610 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 CHMP24386 653 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 OR3A2P47893 321 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 ARSEP51690 589 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 PNLIPRP2P54317 469 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 MPP1Q00013 466 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 SETQ01105 290 aaPredicted RBP2.16□□□□□ -2.06
SRP54-207ENST00000555535 ZNF177Q13360 481 aaPredicted RBP2.16□□□□□ -2.06
SRP54-207ENST00000555535 ITGA7Q13683 1181 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 KRT32Q14532 448 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 PTPN14Q15678 1187 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 GARNL3Q5VVW2 1013 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 CCBE1Q6UXH8 406 aaPredicted RBP2.16□□□□□ -2.06
SRP54-207ENST00000555535 ARHGAP22Q7Z5H3 698 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 ZER1Q7Z7L7 766 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 MMD2Q8IY49 270 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 CD177Q8N6Q3 437 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 UCMAQ8WVF2 138 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 CALML4Q96GE6 196 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 PPM1MQ96MI6 270 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 CDRT15Q96T59 188 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 MGME1Q9BQP7 344 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 NYXQ9GZU5 481 aa2.16□□□□□ -2.06
SRP54-207ENST00000555535 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.16□□□□□ -2.06
SRP54-207ENST00000555535 TRBV5-5A0A0J9YX44 114 aa2.15□□□□□ -2.07
SRP54-207ENST00000555535 TSPAN1O60635 241 aa2.15□□□□□ -2.07
SRP54-207ENST00000555535 GP1BBP13224 206 aa2.15□□□□□ -2.07
SRP54-207ENST00000555535 ZNF19P17023 458 aa2.15□□□□□ -2.07
SRP54-207ENST00000555535 PTGER4P35408 488 aa2.15□□□□□ -2.07
SRP54-207ENST00000555535 LMAN1P49257 510 aa2.15□□□□□ -2.07
SRP54-207ENST00000555535 KHKP50053 298 aa2.15□□□□□ -2.07
SRP54-207ENST00000555535 ATP4BP51164 291 aa2.15□□□□□ -2.07
SRP54-207ENST00000555535 DNA2P51530 1060 aa2.15□□□□□ -2.07
SRP54-207ENST00000555535 DHODHQ02127 395 aa2.15□□□□□ -2.07
SRP54-207ENST00000555535 TRA2AQ13595 282 aaKnown RBP eCLIP2.15□□□□□ -2.07
SRP54-207ENST00000555535 ZNF146Q15072 292 aa2.15□□□□□ -2.07
SRP54-207ENST00000555535 DHRS7BQ6IAN0 325 aaPredicted RBP2.15□□□□□ -2.07
SRP54-207ENST00000555535 CHMP1BQ7LBR1 199 aa2.15□□□□□ -2.07
SRP54-207ENST00000555535 TMEM173Q86WV6 379 aaPredicted RBP2.15□□□□□ -2.07
SRP54-207ENST00000555535 OR4N5Q8IXE1 308 aa2.15□□□□□ -2.07
SRP54-207ENST00000555535 THAP8Q8NA92 274 aa2.15□□□□□ -2.07
SRP54-207ENST00000555535 NAXEQ8NCW5 288 aa2.15□□□□□ -2.07
SRP54-207ENST00000555535 OR7A2PQ8NGA2 310 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms