RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 LMNTD1Q8N9Z9 388 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 DENND6BQ8NEG7 585 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 SKA2Q8WVK7 121 aaPredicted RBP8.61□□□□□ -1.03
TDP1-210ENST00000554976 SLCO4A1Q96BD0 722 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 INSM2Q96T92 566 aaPredicted RBP8.61□□□□□ -1.03
TDP1-210ENST00000554976 APOOQ9BUR5 198 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 SPNS1Q9H2V7 528 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 SERHLQ9NQF3 203 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 PAPOLBQ9NRJ5 636 aaKnown RBP8.61□□□□□ -1.03
TDP1-210ENST00000554976 FAM8A1Q9UBU6 413 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 CIDEBQ9UHD4 219 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 ZNHIT2Q9UHR6 403 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 PPT2Q9UMR5 302 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 TMED5Q9Y3A6 229 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 LRRC42Q9Y546 428 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 TNRC6BQ9UPQ9 1833 aaKnown RBP8.61□□□□□ -1.03
TDP1-210ENST00000554976 PRSS51A0A1B0GVH4 220 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 TCRBV3S1A0A5B6 114 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 H0Y3Z8 333 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 ANP32DO95626 131 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 KRT6AP02538 564 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 KRT6BP04259 564 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 ASGR2P07307 311 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 HSD3B1P14060 373 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 SDC1P18827 310 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 HSD3B2P26439 372 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 MAP4P27816 1152 aaKnown RBP8.61□□□□□ -1.03
TDP1-210ENST00000554976 HNF4AP41235 474 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 KRT6CP48668 564 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 ART3Q13508 389 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 STARD3Q14849 445 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 PTGR1Q14914 329 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 FAM129CQ86XR2 697 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 PTRH1Q86Y79 214 aaKnown RBP8.61□□□□□ -1.03
TDP1-210ENST00000554976 KBTBD2Q8IY47 623 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 GALNT15Q8N3T1 639 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 LIX1Q8N485 282 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 TESCQ96BS2 214 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 METTL2AQ96IZ6 378 aaKnown RBP8.61□□□□□ -1.03
TDP1-210ENST00000554976 SERPINI1Q99574 410 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 C15orf41Q9Y2V0 281 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 CEP192Q8TEP8 1941 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 A6NHS1 94 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 CHURC1-FNTBB4DL54 471 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 SRFP11831 508 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 CLDN8P56748 225 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 MTAPQ13126 283 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 TRIM25Q14258 630 aaKnown RBP8.6□□□□□ -1.03
TDP1-210ENST00000554976 ARHGAP19Q14CB8 494 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 FBXO43Q4G163 708 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 CATSPEREQ5SY80 951 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 PRMT9Q6P2P2 845 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 DOK6Q6PKX4 331 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 SLC2A7Q6PXP3 512 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 GCNT7Q6ZNI0 430 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 PRR23BQ6ZRT6 265 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 DCUN1D3Q8IWE4 304 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 FAM156AQ8NDB6 213 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 OR14C36Q8NHC7 312 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 SETD7Q8WTS6 366 aaKnown RBP8.6□□□□□ -1.03
TDP1-210ENST00000554976 CHTF18Q8WVB6 975 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 KLK6Q92876 244 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 MTFMTQ96DP5 389 aaKnown RBP8.6□□□□□ -1.03
TDP1-210ENST00000554976 BMFQ96LC9 184 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 FOPNLQ96NB1 174 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 ORAI3Q9BRQ5 295 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 YIPF3Q9GZM5 350 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 WASH6PQ9NQA3 447 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 ITM2CQ9NQX7 267 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 LEF1Q9UJU2 399 aaPredicted RBP8.6□□□□□ -1.03
TDP1-210ENST00000554976 MAN2B2Q9Y2E5 1009 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 PLEKHM1Q9Y4G2 1056 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 CCDC154A6NI56 674 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 PRICKLE3O43900 615 aaPredicted RBP8.6□□□□□ -1.03
TDP1-210ENST00000554976 KCNJ13O60928 360 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 LINGO3P0C6S8 592 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 CHRNB1P11230 501 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 SLC2A4P14672 509 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 TACR1P25103 407 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 TPMTP51580 245 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 CLCNKAP51800 687 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 KCNK10P57789 538 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 BLMHQ13867 455 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 EOGTQ5NDL2 527 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 LRIF1Q5T3J3 769 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 PDE4DIPQ5VU43 2346 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 SDE2Q6IQ49 451 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 LRRC74BQ6ZQY2 392 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 KRTCAP2Q8N6L1 136 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 LINC01555Q8NAE3 123 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 PCYOX1LQ8NBM8 494 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 TMEM145Q8NBT3 493 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 GLB1L3Q8NCI6 653 aaPredicted RBP8.6□□□□□ -1.03
TDP1-210ENST00000554976 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.6□□□□□ -1.03
TDP1-210ENST00000554976 MIPOL1Q8TD10 442 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 SELENOMQ8WWX9 145 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 PYDC1Q8WXC3 89 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 GTF2H4Q92759 462 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 FZD3Q9NPG1 666 aa8.6□□□□□ -1.03
TDP1-210ENST00000554976 SPATA7Q9P0W8 599 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms