RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 FTCDO95954 541 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 GOT2P00505 430 aaKnown RBP6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 APOC2P02655 101 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 ZSCAN5DPP0CG00 497 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 RALBP11234 206 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 MSNP26038 577 aaKnown RBP6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 CTNNA2P26232 953 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 NDUFS1P28331 727 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 FOXN2P32314 431 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 RRADP55042 308 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 NAP1L1P55209 391 aaKnown RBP6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 VSX2P58304 361 aaPredicted RBP6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 EEF1A2Q05639 463 aaKnown RBP6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 HSPA14Q0VDF9 509 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 CDC16Q13042 620 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 FASTKQ14296 549 aaKnown RBP6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 GRB7Q14451 532 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 SSPNQ14714 243 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 CDSNQ15517 529 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 NKG7Q16617 165 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 SYT16Q17RD7 645 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 SYTL3Q4VX76 610 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 VWA2Q5GFL6 755 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 LYPLAL1Q5VWZ2 237 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 ZDHHC20Q5W0Z9 365 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 B3GNTL1Q67FW5 361 aaPredicted RBP6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 KCTD11Q693B1 232 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 FCRLBQ6BAA4 426 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 SP5Q6BEB4 398 aaPredicted RBP6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 ITPRIPL1Q6GPH6 555 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 RHBDD2Q6NTF9 364 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 CES3Q6UWW8 571 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 Q6ZS92 163 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 VSIG1Q86XK7 387 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 ZADH2Q8N4Q0 377 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 SIRT6Q8N6T7 355 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 OR8K5Q8NH50 307 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 HDAC10Q969S8 669 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 PTERQ96BW5 349 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 ULK4Q96C45 1275 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 TAAR6Q96RI8 345 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 SRPK1Q96SB4 655 aaKnown RBP6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 MACROD1Q9BQ69 325 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 TMEM121Q9BTD3 319 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 ACAT2Q9BWD1 397 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 YIPF2Q9BWQ6 316 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 SLC29A3Q9BZD2 475 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 BHLHE41Q9C0J9 482 aaPredicted RBP6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 MVB12BQ9H7P6 319 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 ZNF160Q9HCG1 818 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 TXLNGQ9NUQ3 528 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 NLE1Q9NVX2 485 aaPredicted RBP6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 GALPQ9UBC7 116 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 HEBP2Q9Y5Z4 205 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 IGHV3-20A0A0C4DH32 117 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 A0A0J9YVX5 310 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 GRID2IPA4D2P6 1211 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 HACD1B0YJ81 288 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 AGPSO00116 658 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 JRKO75564 520 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 DDAH2O95865 285 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 PKLRP30613 574 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 SHMT2P34897 504 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 MAT1AQ00266 395 aaKnown RBP6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 CACNG1Q06432 222 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 SNX1Q13596 522 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 TSTA3Q13630 321 aaPredicted RBP6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 PRPSAP1Q14558 356 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 PRAMEF13Q5VWM6 474 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 CYB5D1Q6P9G0 228 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 FIGLAQ6QHK4 219 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 SUSD1Q6UWL2 747 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 RAD9BQ6WBX8 426 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 ZNF534Q76KX8 674 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 BZW1Q7L1Q6 419 aaKnown RBP6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 PLD3Q8IV08 490 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 CDKL3Q8IVW4 592 aaPredicted RBP6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 OR11G2Q8NGC1 345 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 OR1N1Q8NGS0 311 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 OR13J1Q8NGT2 312 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 OR6P1Q8NGX9 317 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 DTX3LQ8TDB6 740 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 SEC14L1Q92503 715 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 FER1L6-AS2Q96M78 137 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 VAT1Q99536 393 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 TRIM56Q9BRZ2 755 aaKnown RBP6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 DESI2Q9BSY9 194 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 NDC1Q9BTX1 674 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 MENTQ9BUN1 341 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 ENAMQ9NRM1 1142 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 CUTCQ9NTM9 273 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 IL1RAPL1Q9NZN1 696 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 PTGFRNQ9P2B2 879 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 VTI1BQ9UEU0 232 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 ZC3H7BQ9UGR2 993 aaKnown RBP6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 ITGB1BP2Q9UKP3 347 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 G3BP2Q9UN86 482 aaKnown RBP6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 PLCL2Q9UPR0 1127 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 PADI2Q9Y2J8 665 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms